Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02737 ATGATAGAATATGTGCATAATATGAGAGGTAGGGTTGCCAGCTATCAACTACCACAACTAATCCGACCGATCCATCTATCCATCCACCCATTTTGTCAAGCATATGCTCTCTTTTTTCATTTTCAACTTATCTTCCAACTGTTTGATATCTCCCCATCAAACTCACATGTATATAAGCTTCTTTCCACACACCTCTTCCACGAACCATCCAATCTCACCTTCTTCCTCTTCAACTATTCCTCCATCTTCACCACCAATAACCCATCACTGCCCAAGCTAATCGTGTTTATACAACAATCACAATCACAAACCCATACCCTTCCAACCAAGCCATTCAAAATGAACCGTGCGGAGCATATCGCTTATGACATGGTCATGATCACTCTATCCGTATCTCTGGTCGTTCTTGGCATCATCCTCTTCCTAGCTTGCAAGAAGAAACCCGTTGAATCCGAAGAAACACTTCCCGTGAAGCTGTGTGCTCGTGCATACCCCTTGACGGAAGTTGATGCCGCCACCGATGGCTTCAACCACAGGAGAATCATTGGGCAGGGTCGCCTAGGAACCGTGTACGCAGGGACACTGGAGAAAGAAGAGTTTGTAGCTGTTAAAAGGATTCACCCCGTTCTTGTGTTGAGCAATGCAGGTTTTGGTTTCTCATCCGTTTTGAAATGGCTCTCCTTGGCCCAACACCCCAACGTAGTTCCAATCATAGGGTTCTCAGAAGCACCGGGTGAGAGAGTTATTCTGATGGAGTTCGTGCACATGGCGAGCTTGGACTTCTACTTGCATCAAAACCAAGACGGGGCTTCACTTTTGGATTGGAACAAGAGGTTCAGGATTGCAGCTGGAGCAGCCAGAGGGCTTCAATACCTGCATGAAGTGGTGGCACCAAACATTGTACATGGGTGTGTTAAGTCCTCTAATATCCTGATCGATGTGAACTTCTGTGCTAGGATTTCTGATTATGGGCTTAACTTTTTGGCACCTGTGGAAAAGAGAGGGCTAGTGGGGTACGTGGATGATGAATATTGGAGTGAAAGAAGGGGTGGTGGAGCTACCAAGGAGAGTGATGTTTATGGGTTAGGGGTGGTCCTGCTTGAGCTTTTAACTGGAAAAGGGTGTGAGGGAGGGTTGTTGGTGAAGTGGGCATTGCCTTTAATTAGAGAAACCAGTTTTAGTGAACTATTAGATCCTAGGTTGGTGATTCCTTCTGACACGAAGCCTCTGGTTAGATTAGCCAAAGTTGCTTCAGCATGTGTCGGTAACTCACGCAAATGTAGACCTTCTGTCGCTCAAGTGGCTACCATTTTGAACAATTTAGAGACTGAAGTGTGCCTCTGA 1344 0.4598 MIEYVHNMRGRVASYQLPQLIRPIHLSIHPFCQAYALFFHFQLIFQLFDISPSNSHVYKLLSTHLFHEPSNLTFFLFNYSSIFTTNNPSLPKLIVFIQQSQSQTHTLPTKPFKMNRAEHIAYDMVMITLSVSLVVLGIILFLACKKKPVESEETLPVKLCARAYPLTEVDAATDGFNHRRIIGQGRLGTVYAGTLEKEEFVAVKRIHPVLVLSNAGFGFSSVLKWLSLAQHPNVVPIIGFSEAPGERVILMEFVHMASLDFYLHQNQDGASLLDWNKRFRIAAGAARGLQYLHEVVAPNIVHGCVKSSNILIDVNFCARISDYGLNFLAPVEKRGLVGYVDDEYWSERRGGGATKESDVYGLGVVLLELLTGKGCEGGLLVKWALPLIRETSFSELLDPRLVIPSDTKPLVRLAKVASACVGNSRKCRPSVAQVATILNNLETEVCL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02737 447 Pfam Protein tyrosine and serine/threonine kinase 179 436 IPR001245 GO:0004672|GO:0006468
Viun6g02737 447 FunFam Receptor protein kinase CRINKLY4 254 445 - -
Viun6g02737 447 SUPERFAMILY Protein kinase-like (PK-like) 153 438 IPR011009 -
Viun6g02737 447 Gene3D Transferase(Phosphotransferase) domain 1 255 445 - -
Viun6g02737 447 ProSiteProfiles Protein kinase domain profile. 176 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02737 447 PANTHER OS01G0253100 PROTEIN 124 442 - -
Viun6g02737 447 Gene3D Phosphorylase Kinase; domain 1 142 253 - -
Viun6g02737 447 FunFam serine/threonine-protein kinase-like protein ACR4 143 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02737 Viun-Chr6 31282283 31284193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02737 161 438 Receptor kinase-like Gene Family AT3G59420 39.384 1.21e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Viun6g02737 PK_Tyr_Ser-Thr 3.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02737 - - vun:114187437 874.389