Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02736 ATGACATGGTGCAATGACTCCGATGAGGAGAAGAGGATTGAATCAATCACGCCAACTATGACTTTTACTCAAAAGACTAATGTCACTGACGTAAAACTCTCCGAACAAATTCGAACCATAAGATGCCCCTCCTGCGCCCATAACATTGAATTCAGAGATCAGGGTGGAATTCATGACTTGCCGGGGTTACCGGCAGGAGTGAAATTTGACCCAAATGATCAAGAAATACTAGAGCACTTAGAGGCAAAAGTGGCGTCTGATGCATGCAAGCTTCATCCCCTTATTGATGAGTTCATACCAACTCTTGAAGGTGAGAATGGGATTTGCTCAACGCACCCGGAAAAACTACCAGGAGTGGGCAAAGATGGACAGATCCGGCACTTCTTTCACAGGCCATCAAAAGCATACACAACCGGAACGAGGAAAAGAAGAAAGGTTGAGAGCGATGAAGAAGGAAGTGAAACAAGATGGCACAAAACGGGAAAAACTAGAGCTGTTTTTGCAGGCGGTGGTGGTGCTGTGAAGGGTTTTAAGAAAATACTAGTACTCTACACCAACTATGGCCGGAAAAAGAAGCCGGAGAAGACTAATTGGGTGATGCATCAATATCATCTTGGCAGCACTGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAGATCTTCTATCAGAAACAACCCAGACAATGTGGTAATAATCCCAATATCATAGAGGACCCGTACGCAAAAATGTTGAATGTTGATGGAAGTGGCCACAACAACAATACATCAACACCTAAAACTACCACTATTGTGGATTGCTACAATGCTCCTTACGTAAACTATGATAATGTCCATTTGAGTTACAATAGGGAAAGCTCCAAACAAATAATTATTCCCAGCTCGGTTGTTGCAGCTGATGACTCTTACATTCGCTATGCAATGAATGCAAAGAGAGCAAGATTTGAAACTAACACTGGGAACAATTTCTAG 972 0.4239 MTWCNDSDEEKRIESITPTMTFTQKTNVTDVKLSEQIRTIRCPSCAHNIEFRDQGGIHDLPGLPAGVKFDPNDQEILEHLEAKVASDACKLHPLIDEFIPTLEGENGICSTHPEKLPGVGKDGQIRHFFHRPSKAYTTGTRKRRKVESDEEGSETRWHKTGKTRAVFAGGGGAVKGFKKILVLYTNYGRKKKPEKTNWVMHQYHLGSTEEEKDGELVVSKIFYQKQPRQCGNNPNIIEDPYAKMLNVDGSGHNNNTSTPKTTTIVDCYNAPYVNYDNVHLSYNRESSKQIIIPSSVVAADDSYIRYAMNAKRARFETNTGNNF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02736 323 Pfam No apical meristem (NAM) protein 64 205 IPR003441 GO:0003677|GO:0006355
Viun6g02736 323 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 26 268 IPR044799 GO:0003700
Viun6g02736 323 ProSiteProfiles NAC domain profile. 63 224 IPR003441 GO:0003677|GO:0006355
Viun6g02736 323 MobiDBLite consensus disorder prediction 136 158 - -
Viun6g02736 323 SUPERFAMILY NAC domain 58 224 IPR036093 GO:0003677|GO:0006355
Viun6g02736 323 MobiDBLite consensus disorder prediction 140 158 - -
Viun6g02736 323 Gene3D NAC domain 72 228 IPR036093 GO:0003677|GO:0006355
Viun6g02736 323 FunFam NAC domain-containing protein 73 72 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02736 Viun-Chr6 31262634 31265962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02736 1 233 NAC Transcription Factor Family AT4G28500 69.658 2.14e-117 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun6g02736 NAM 1.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02736 - - gmx:100809389 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02736 6 31262634 31265962 Viun6g02736 6 31262634 31265962 ECH