Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02733 ATGGGGTTGATCGATCTGAACACCACCGAGGATGATGAAGCTCCATTATCTGCTTCTTCTTCTTCTGCTGCTTCGTCTTCTTCTTCTCACTCGGGGATAAGCACTTCTGCTTCAACCCTCGTTGGTCCTCCTCCTCCTCCGCCTCCTCCTCCTTCTTCCGTCTGCTTGGAACTGTGGCACGCGTGTGCGGGTCCTTTGATCTCTCTGCCCAAGAAAGGAAGTGTTGTTGTGTACTTGCCACAGGGACACTTTGAGCATGTTCAGGATTTTCCGGTCACTGCTTATGATATCCCACCCCATGTGTTCTGTCGTGTTCTTGATGTCAAGCTCCATGCAGAGGAAGGGAGCGATGAAGTATATTGCCAAGTGTTGTTGGTTCCTGAAAGTGAGCAAGTGGAGCAAAGTTTGCGTGAAGGCGAAATTGAAGCTGACGGGGAAGAGGAGGACACTGAAGCTATGGTGAAGTCAACAACTCCCCATATGTTCTGCAAGACTCTCACAGCTTCAGACACCAGCACTCATGGTGGATTTTCAGTGCCTCGCCGAGCGGCTGAAGATTGCTTTCCTCCTCTGGATTACAGTCAACAGAGACCTTCACAGGAGCTCGTGGCTAAGGATCTTCATGGCCTGGAATGGAGGTTTCGTCATATATACAGGGGCCAGCCACGCAGGCATTTGCTAACTACTGGGTGGAGTGCATTTGTGAACAAAAAGAAGCTTGTTTCTGGAGATGCTGTGTTGTTTCTTAGGGGCGACGATGGAGAACTGAGATTAGGGATTCGTAGGGCAGCCCAGTTGAAAGGTTCTGGTTCCTTTGCAGTTCCTACTGGTCAGCAGTTGAATCCTGGAACTTTCATGGATGTTGTTAATGCATTATCTGCAAGATGTGCTTTTAGTGTTTGCTACAATCCAAGGTTTAGCTCTTCAGAATTCATCATACCTGTTCACAAATTCTTAAAGAGTCTTGATTGTTCTTATTTAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACCGAAGATGCTGCAGAGCGGAGATTTACTGGATTAATTGCTGGAATCAGTGATGTTGATCCTGTCAGATGGCCTGGATCAAAATGGAGATGCCTACTGGTAAGGTGGGATGACATGGAAGCTGCTAGGCACAATAGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTGCTTCAAGTTCCAGCAACATGATGGCAGCTGGTTTGAAGAGGACCAGGATTGGAATGACTTCAACGAAGATGGAATTTCCTTCTCCCAATGGGATTGGAACATCAGACTTTGGGGAATCATTAAGGTTCCGGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATCCTCCCTTTGATGGTGTTAATGCTCAGACTCCTCGGTTATACGACTTAGGGAGGTACTATATAGGTCCAAACTGTCCTGGGATTCCTCCAACAGGAAATAACATCAGGATGCCGCATGCAGCATCTGATTTTTCCTGCAATGGCACAGGCTTTAGTGAATCTTTCCGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTCTTCCAAGCCAACCATATGGAAGAGCACTGTCAATAGAGGAGGCTCGAGCTAATGGTCGCTTTGGACATTTTGATGGTTATCAGTTGCTTAACTCCAGAAATGGGTGGTCTGTGCAGATGCATGACAATGCTCCGCATTTGCATGCATCTGTTACACCTTCACAGGTGTCATCTCCATCATCCGTGTTAATGTTCCAGCAAGCAGTTAATCCAGTTTCTAACAGTGATTATAATACTAAGAAACATAGTAAGATGTACCAAGGTTTATGTGCATCTGAAGTGAAAGCTAGAACATTTGCATCTCCCCCATCTGATGATCTTGCTTTCTCTAGGCGAGCTCCAGAAAGGGCTAGTTCTTTAGGTATGTTTGATGTTCGTAATCGGCTGGGGAGTTCACAGTCACACAATTCTGTGTCAGCATTGAGAAACAATCAAGAGTTGGTTTCCTCATGTAAAAGTAGTTGTAGACTCTTTGGTTTTTCATTGACTGAGGACACACATGTTGCAACCAAAGAGGTTGATGCCTCTACCATCACTTTACCAATGAATGCTGGACCTTCCTTTACTAGAATTGTTGAAGATGAGTTTCATCCCAGCAGGGCACTGCAGAGCAAGGCGGTTGGAAGTAACTGCACAAAGGGTGTGTTGCAGTATTGA 2205 0.4594 MGLIDLNTTEDDEAPLSASSSSAASSSSSHSGISTSASTLVGPPPPPPPPPSSVCLELWHACAGPLISLPKKGSVVVYLPQGHFEHVQDFPVTAYDIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEQSLREGEIEADGEEEDTEAMVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKGSGSFAVPTGQQLNPGTFMDVVNALSARCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYLVGMRFRMRFETEDAAERRFTGLIAGISDVDPVRWPGSKWRCLLVRWDDMEAARHNRVSPWEIEPSGSASSSSNMMAAGLKRTRIGMTSTKMEFPSPNGIGTSDFGESLRFRKVLQGQEILGVNPPFDGVNAQTPRLYDLGRYYIGPNCPGIPPTGNNIRMPHAASDFSCNGTGFSESFRFQKVLQGQEILPSQPYGRALSIEEARANGRFGHFDGYQLLNSRNGWSVQMHDNAPHLHASVTPSQVSSPSSVLMFQQAVNPVSNSDYNTKKHSKMYQGLCASEVKARTFASPPSDDLAFSRRAPERASSLGMFDVRNRLGSSQSHNSVSALRNNQELVSSCKSSCRLFGFSLTEDTHVATKEVDASTITLPMNAGPSFTRIVEDEFHPSRALQSKAVGSNCTKGVLQY 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02733 734 SUPERFAMILY DNA-binding pseudobarrel domain 155 269 IPR015300 -
Viun6g02733 734 SMART B3_2 162 264 IPR003340 GO:0003677
Viun6g02733 734 MobiDBLite consensus disorder prediction 1 52 - -
Viun6g02733 734 FunFam Auxin response factor 325 396 - -
Viun6g02733 734 Gene3D - 160 264 IPR015300 -
Viun6g02733 734 MobiDBLite consensus disorder prediction 12 39 - -
Viun6g02733 734 Pfam B3 DNA binding domain 162 263 IPR003340 GO:0003677
Viun6g02733 734 FunFam Auxin response factor 160 264 - -
Viun6g02733 734 CDD B3_DNA 160 262 IPR003340 GO:0003677
Viun6g02733 734 ProSiteProfiles B3 DNA-binding domain profile. 162 264 IPR003340 GO:0003677
Viun6g02733 734 Pfam Auxin response factor 289 369 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Viun6g02733 734 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 53 687 IPR044835 GO:0003677|GO:0006355|GO:0009725
Viun6g02733 734 Gene3D - 326 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02733 Viun-Chr6 31229988 31236120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02733 161 519 B3 DNA Binding Superfamily AT2G33860 60.000 9.89e-146 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Viun6g02733 B3 3.6e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02733 K14486 - gmx:100789906 1239.17