Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02729 ATGGAAAAGATGGATGTTGAAGAGTTGTTTGAGGCTCAGGCTCATTTATACAAGTATACTTACAGTTTCGTATCTTCCATGTGCCTCAAAAGTGCAGTTCACTTGGGAATACCAGACGCAATCTTCAAGAATGGCCAACCTATTACTCTCCCCGAGTTGGTCTTGGCACTTCAGATTCAACTAACAAAATCTGGTCATGTATACAGACTCATGCGCGTGCTGGTGCATGCTGGCTTCTTTGCCACCACCAAGGTTGTGAAAGATGATACGGAAGAAGTGGGGTATGATCTCACACCTTCTTCAAGGCTACTCCTTAAGGACAATGTTCCAACCTTGTCTCCTTTTGTTCGAGCAATGTTTCATCCGGCTCTGGTTCACTCATCAGAATCATTGCCTGAGTGGTTTCACAGAAATGAGACCACACCCTGTGAAACTGCGTTTGGGATGAGTTTCTGGGAGTACTTGAGTCAAAACCAAGAGTTTAACGGCCTCTTCAATGAAGCAATGGTCAGTGATTCTGGGATGGTGAATTTGGTTATGAAAAACTGTAAATCTGCTTTTGAGGGACTGAATTCATTGGTTGATGTTGGTGGTGGTAAAGGAGGTGTAGGTAAGATAGTTTGTGAATCACTGCCTAATTTGCAATGGACCGTGCTTGATCTTCCACATGTTGTTGAAAATTTGTCTGACAGTACCAGTTTGAAGTTTGTTGGAGGTGACATGTTTCAGTCTATTCCTTCAGCAGATGCTGTTCTTCTTAAGTTAGTGTTGCATGCTTATAGTGATGAAGAATGCGTTAAGGTACTGAAGAAATGCAAAGAAGCTGTTTCAAAGAAGGGGAAGGCAGGGAAAGTAATTATCATAGACATAGTGGTTGGTCAAAAGAATGAAAATCATGAATTGACCGAAGCAAAGCTGTTTTTTGATATGATAATGATGATTGTGGTCACTGGGAAGGAGAGAGAAGAAAAAGAATGGGAGAAACTCTTCTTGGAAGCTGGATTTAGTCATTACAAGATAACAAACATCTTTGGTATGAGATCCCTCATTGAAGTTTATCCTTGA 1065 0.4122 MEKMDVEELFEAQAHLYKYTYSFVSSMCLKSAVHLGIPDAIFKNGQPITLPELVLALQIQLTKSGHVYRLMRVLVHAGFFATTKVVKDDTEEVGYDLTPSSRLLLKDNVPTLSPFVRAMFHPALVHSSESLPEWFHRNETTPCETAFGMSFWEYLSQNQEFNGLFNEAMVSDSGMVNLVMKNCKSAFEGLNSLVDVGGGKGGVGKIVCESLPNLQWTVLDLPHVVENLSDSTSLKFVGGDMFQSIPSADAVLLKLVLHAYSDEECVKVLKKCKEAVSKKGKAGKVIIIDIVVGQKNENHELTEAKLFFDMIMMIVVTGKEREEKEWEKLFLEAGFSHYKITNIFGMRSLIEVYP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02729 354 FunFam Coniferyl alcohol 9-O-methyltransferase 1 104 - -
Viun6g02729 354 FunFam O-methyltransferase ZRP4 106 354 - -
Viun6g02729 354 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Viun6g02729 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 353 IPR029063 -
Viun6g02729 354 SUPERFAMILY "Winged helix" DNA-binding domain 7 108 IPR036390 -
Viun6g02729 354 Gene3D Vaccinia Virus protein VP39 105 354 IPR029063 -
Viun6g02729 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 354 IPR016461 GO:0008168
Viun6g02729 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Viun6g02729 354 Gene3D - 1 104 IPR036388 -
Viun6g02729 354 Pfam O-methyltransferase domain 134 336 IPR001077 GO:0008171
Viun6g02729 354 PANTHER O-METHYLTRANSFERASE 9 339 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02729 Viun-Chr6 31207387 31208870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02729 11 352 Monolignol Biosynthesis Gene Families AT5G54160 33.144 2.79e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02729 K22588 - qsu:112018723 451.825