Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02727 ATGAAGAAAATTTCCAAGAGCAGCTGCAAGTCCGCATCACACAGACTCTTTAAAGACAAGGCAAGGAACCATGTTGATGATCTACAGGTCATGTTCTTGGATCTGCAGTTTGCAAGAAAGGAGAGCCGCACGATTGATGTGGCACTCCTTGAGGAGCAAGTCCATCAAATGCTTCGTGAGTGGAAGGCTGAGCTCAATGAGCCTTCTCCAGCTTCTTCTCTGCAGCAAGGTGGTAGTCTTGGTTCATTCTCGACCGATGTCTATAGGCTATTGCAGCTCTGTGAGGAGGAAGACGATGCTACTAGTCCATTAGTTGCACCTAAGTCTGAACCTAATGATCAAACTATGCAGGCTGAAGCTAGGGTCATAGTGCAAGAGGGCCACCATGAACAAGAATTTCTATTACTTAAAGAATGCAAACACTCAGCAGTAGGAGTTCCCAACATGGCAGTAAACAACTTGGACGGACCTGGTTTAGAATTTCATCAATTTGAATTCAGTAAGGACTTGGATCACAGTTTTTATGCTGGTACAGGATTTTGTGAGGAAGGTGGTGTTCCTCATATATCTAGCTATCTTCCAAGTGCGTGTCCTCCTCCTTCTGCTTTCCTAGGTCCAAAATGCGCACTTTGGGACTGTCCAAGACCTGTTCAAGGGTTGGAGTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTAAACGAAGGACCACCAGGCATGACCCCAGTTCTAAGACCTGGGGGAATTGGACTCAAGGATAACTTACTTTTTGCTGCTCTTAGTGCAAAGGCACACGGAAAAGTTGTTGGCATCCCTGAATGTGAGGGAGCAGCAACTGCCAAATCTCCATGGAATGCACCTGAACTGTTTGATATTTGTGTTCTGGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTAGAAGGGCTTTTGAGAGTGGGAACAGAAAGCAGAGGTCACTGCCGGATTATAGCGGGCGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCTTATTACATGGATCCTCAACCTCTGAACCTTTTTGAATGGCACCTTTACGAGTATGAAATTAGCAAGTGTGATGCATGTGCCTTATATCGGTTAGAACTGAAGCTTGTTGATGGGAAAAAGAGCTCAAAGACAAAGATCATAACAGGTGATTCGGTTGCTGATCTGCAGAAGCACATGGGAAGCCTCTCTGCTGAGTTTCACTCTGATAGTAACAAACGTTCTGCCAAAGGTAGTAGAACAAAGCTTGGCATAGGAGGTGGTGTTTATTCAGCTTCTAACAGACCTGCTCTACTAAATGCACCTTATCAATACGGCTTAACTGCACCATATGACTTTGTTGTTGACAACACAAGTGACTATATGTGA 1419 0.4475 MKKISKSSCKSASHRLFKDKARNHVDDLQVMFLDLQFARKESRTIDVALLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDVYRLLQLCEEEDDATSPLVAPKSEPNDQTMQAEARVIVQEGHHEQEFLLLKECKHSAVGVPNMAVNNLDGPGLEFHQFEFSKDLDHSFYAGTGFCEEGGVPHISSYLPSACPPPSAFLGPKCALWDCPRPVQGLEWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAHGKVVGIPECEGAATAKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISKCDACALYRLELKLVDGKKSSKTKIITGDSVADLQKHMGSLSAEFHSDSNKRSAKGSRTKLGIGGGVYSASNRPALLNAPYQYGLTAPYDFVVDNTSDYM 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02727 472 PANTHER TRANSCRIPTION FACTOR VOZ1 1 469 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02727 Viun-Chr6 31193464 31196422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02727 3 471 VOZ-9 Transcription Factor Family AT1G28520 65.849 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Viun6g02727 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02727 - - gmx:100784593 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02727 6 31193464 31196422 Viun6g02727 6 31193464 31196422 ECH