Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02715 ATGGATCAACGACATAAAGTGATTCTTCTTCAGCTGCTTCTTTTCCAAGTTCTGCTTGTTGCATCACAGACAGACAGTCGAGATTATTCTGCACTAAACTCCCTTACACAATCCTGGAGTAACAAGCCACAAAGTTGGGTGGGTCAAGATCCTTGCAGTGGCTGGGATGGAATTCGTTGCAGCAATACAAGAATCACCCAATTGAGAGTTCCAGGCTTGAATATTGGTGGCCAACTATCTTCTGCAATTGAATCTTTATCTGAACTAGACACTCTGGATCTTTCTTACAACACAGGTTTGACGGGAACAATTCCAGCAGAAATTGGAAATATGAAAAACCTAAAATCCCTATCATTGGTTGGTTGTGGTTTCTCTGGTCCGATTCCAGATTCAATAGGATCTCTAACGCAGCTGACCTTTCTAGCATTGAACTCTAACAAGTTCAGTGGAAATATACCTCGCTCTCTTGGCAATCTAACAAATATCAATTGGCTTGATCTTGCTGAAAACGAGCTTGAAGGGACTATCCCTGTCTCTGATGACCAAGGACGACCAGGCCTTGACCTGCTCCTTAAGGCACAACACTTCCATATGGGGAGCAATAAGCTCACTGGTACAATACCAGAAAAACTTTTCAACTCCAGTATGATTCTGGAACACGTGCTTTTTGACCACAATCAACTAGAGGGAAGTGTTCCTAGTTCCATTAGTTCTGTGGGGACATTGGAAGTTCTGCGCTTAGACAAGAATGGATTAACAGGGGGAGTGCCGACAACCTTAAGCAGACTCGGAAAACTAAGTGAGATCTATTTATCTCACAATAAGCTGAATGGCAGTTTGCCCGATTTTACTGGAATGAATAGTCTCACCTACGTGGACATGAGCGACAATGCTTTCAATTCCTCTAATATACCTTCATGGGTTTCAGGTCTGCCAGCACTGACAACAGTGATACTTGGGCAGAACCGGCTCGGTGGCACGCTAAATCTCAGTAGCTACAGCAAAAGTCTGCAACTCATAAATTTGGAGACTAATGAAATAACAGAGATTGACCCGCAAAACAATCTACCAAGTTTTGAAATAAGACTAGCTAACAACCCAGTTTGTCGTGAAAGTGGATCTTCTCAGAATAGTTACTGCCAAGAAGCAGCACCAAATCCCTCATTTTATTCAACACCATCCAATAATTGTTCTCCTCCATCTTGCAGTTCTGATGATCAGATTGCCAGCCCAAATTGTATATGTGCATTTCCCTATACTGGACTTCTTATATCGAGAGCTCTTAGTTTCTCAAACTTCAGTGACGCAAGTTACTATAGGGAGCTTGAGCAGTCTCTGATGGATACTTTCCGAAACCAAAGCCTTCCAGTGGATTCAGTTGCTCTTAGTAACCCCATGAGAAATTCTACTTCTGATAACTTTGAATTGACTCTCCAAGTCTTCCCTTCGCAAAGCGATCGTTTCAATTCAACTGGAGTTTTATCCATTGCTTTTCTGCTTAGCAACCAAATTTATAAGCCCCCAGAGTTCTTCTCCCCATACATCTTCAAGGGTGCTAATTATGATTACACAGGAGGAGAACCAAAAGGATCAAAATCATCACATACCGGGATTATAGTTGGTGCTGTAGTAGCTGTTGTGGCCTTTATTGTACTAGCATCCCTTGCAGGGATGTATGCCATTCGCCAGAAAAGAAGAGCAGAAAGATCTGCAGGGTTGAACCCTTTTGCTAACTGGGAACAGAATAAGAATAGTGGCACTGCTCCTCAGTTGAAAGGAGGACGATGGTTTGCTTTTGATGACCTAAGGAAATACACCAACAACTTCTCAGAAACCAATACTATTGGATCTGGAGGCTATGGACAGGTCTACCAAGGAACTCTTCCCTCTGGGGAGTTGGTTGCTATCAAACGGGCTGCAAAAGAATCTATGCAGGGTGCTGTTGAGTTTAAAACCGAGATTGAACTTCTATCAAGGGTCCATCACAAGAATCTCGTTAGTCTTGTGGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTGTATGAGTACATTCCCAATGGCACTTTAATGGACAGTCTCTCAGGAAAGTCTGGGATCTGGATGGATTGGATAAGGAGACTTAAAGTAGCATTAGGTGCAGCCAGGGGTCTGGCTTATCTTCATGAACTTGCTAACCCACCAATCATACACAGGGACATCAAATCTAGCAATATCTTACTTGATCATCACCTCAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAACTTCTTGTTGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCTGAATATTACATGACCCAGCAGTTGACAGAAAAGAGTGATGTTTATAGCTATGGAGTGCTAATGCTGGAACTAGCAACAGCAAGAAGGCCAATAGAGCAAGGAAAGTATATTGTAAGAGAAGTAATGAGGGTAATGGACACGTCAAAAGATTTATACAACCTTCATTCCATTCTAGACCCAACCATAATGAAAACAAGGCCAAAAGGTTTAGAAAAGTTTGTGATGTTGGCAATGAGGTGTGTCAAAGAATATGCAGCTGAGAGGCCTACAATGGCAGAGGTTGTAAAAGAGATTGAGAGCATAATCGAGCTTGTTGGATTGAACCCGAATTCTGAATCAGCTACAACATCAGAAACTTACGAGGAAGCAGGTGGAGGAAAAGCCCAACATCCTTACAGGGAAGAAGATTTTAGCTATAGTGGAATGTTTCCGTCAACAAGGGTAGAACCCCAATAG 2793 0.4246 MDQRHKVILLQLLLFQVLLVASQTDSRDYSALNSLTQSWSNKPQSWVGQDPCSGWDGIRCSNTRITQLRVPGLNIGGQLSSAIESLSELDTLDLSYNTGLTGTIPAEIGNMKNLKSLSLVGCGFSGPIPDSIGSLTQLTFLALNSNKFSGNIPRSLGNLTNINWLDLAENELEGTIPVSDDQGRPGLDLLLKAQHFHMGSNKLTGTIPEKLFNSSMILEHVLFDHNQLEGSVPSSISSVGTLEVLRLDKNGLTGGVPTTLSRLGKLSEIYLSHNKLNGSLPDFTGMNSLTYVDMSDNAFNSSNIPSWVSGLPALTTVILGQNRLGGTLNLSSYSKSLQLINLETNEITEIDPQNNLPSFEIRLANNPVCRESGSSQNSYCQEAAPNPSFYSTPSNNCSPPSCSSDDQIASPNCICAFPYTGLLISRALSFSNFSDASYYRELEQSLMDTFRNQSLPVDSVALSNPMRNSTSDNFELTLQVFPSQSDRFNSTGVLSIAFLLSNQIYKPPEFFSPYIFKGANYDYTGGEPKGSKSSHTGIIVGAVVAVVAFIVLASLAGMYAIRQKRRAERSAGLNPFANWEQNKNSGTAPQLKGGRWFAFDDLRKYTNNFSETNTIGSGGYGQVYQGTLPSGELVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIPNGTLMDSLSGKSGIWMDWIRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDHHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSYGVLMLELATARRPIEQGKYIVREVMRVMDTSKDLYNLHSILDPTIMKTRPKGLEKFVMLAMRCVKEYAAERPTMAEVVKEIESIIELVGLNPNSESATTSETYEEAGGGKAQHPYREEDFSYSGMFPSTRVEPQ 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02715 930 FunFam Leucine-rich repeat protein kinase family protein 183 282 - -
Viun6g02715 930 Gene3D Ribonuclease Inhibitor 281 412 IPR032675 -
Viun6g02715 930 Pfam Protein kinase domain 610 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02715 930 Gene3D Ribonuclease Inhibitor 183 280 IPR032675 -
Viun6g02715 930 FunFam Leucine-rich repeat family protein 27 181 - -
Viun6g02715 930 PANTHER RECEPTOR-LIKE PROTEIN 55 34 880 - -
Viun6g02715 930 Gene3D Transferase(Phosphotransferase) domain 1 685 897 - -
Viun6g02715 930 MobiDBLite consensus disorder prediction 891 930 - -
Viun6g02715 930 FunFam Leucine-rich repeat protein kinase family protein 576 684 - -
Viun6g02715 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Viun6g02715 930 Pfam Leucine rich repeat 241 298 IPR001611 GO:0005515
Viun6g02715 930 Gene3D Ribonuclease Inhibitor 24 182 IPR032675 -
Viun6g02715 930 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 685 893 - -
Viun6g02715 930 SUPERFAMILY Protein kinase-like (PK-like) 595 888 IPR011009 -
Viun6g02715 930 Gene3D Phosphorylase Kinase; domain 1 579 684 - -
Viun6g02715 930 SMART serkin_6 609 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02715 930 SUPERFAMILY L domain-like 59 368 - -
Viun6g02715 930 CDD STKc_IRAK 615 880 - -
Viun6g02715 930 ProSitePatterns Protein kinases ATP-binding region signature. 615 641 IPR017441 GO:0005524
Viun6g02715 930 ProSiteProfiles Leucine-rich repeat profile. 336 357 IPR001611 GO:0005515
Viun6g02715 930 ProSiteProfiles Protein kinase domain profile. 609 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02715 Viun-Chr6 31156085 31163182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02715 8 930 Receptor kinase-like Gene Family AT5G49760 52.101 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Viun6g02715 Pkinase 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02715 - - gmx:100786172 1605.5