Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02711 ATGGATATTCATAGTAATAATCAGGGTGAAGGGATTCTTGAGAATGTATGGGCCAAAATTATGAGCAGTGATAAAGCAGATGAAAGAAAAGGTGGTGATGATGGTGCAGAGTCTTGTAACTCTTGGGAAGAACTCCCTGACCTTGATGGAAGAGAAGGGTCGATGGAAATTCTACAGAGACTTCCAAGTTTAGGGAGGTGGATATCAATGGGAGCTGATTTCTGGGAAGAGGTTTTAGATGGTATTGTTGTACCTAACAGAAGCAATAGAGAAAATTGTAGCAGTAAGAATAAGGAAAATGGAAGAGGTGGTGAATGTAATAAGAAGGTGGAAGATGGTGTGAAGGAAGTTAGAAAACACTACAGAGGAGTTAGGAGAAGGCCTTGGGGTAAATATGCTGCAGAGATTAGAGACTCGTCGAAGAAAGGTGCAAGAGTTTGGCTTGGAACATTTGAAACCGCTGAAGAAGCTGCTCTGGCTTATGACAAGGCTGCTTTGAGGATTAGGGGTCCAAAGGCATACCTTAATTTCCCACTCGAGAGGGTTGCAAAGGCTTTAGGATGTGACAACAAAGAAAATTTGATCAAGTCTAGGAAGAGGGGATCAATTGATGATGAAATTGATATGATGAATGAAGAACCTGCAAGAAAAAAGTTGGAATGCATGGTAGAAAATGAACTAGGTGTTTTTGTATTTCAGGATCTAGGAAGTGATTACTTGGACAGTTTGTTGTCCTCTTTTTGA 744 0.4059 MDIHSNNQGEGILENVWAKIMSSDKADERKGGDDGAESCNSWEELPDLDGREGSMEILQRLPSLGRWISMGADFWEEVLDGIVVPNRSNRENCSSKNKENGRGGECNKKVEDGVKEVRKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFETAEEAALAYDKAALRIRGPKAYLNFPLERVAKALGCDNKENLIKSRKRGSIDDEIDMMNEEPARKKLECMVENELGVFVFQDLGSDYLDSLLSSF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02711 247 FunFam Ethylene-responsive transcription factor 2 119 180 - -
Viun6g02711 247 ProSiteProfiles AP2/ERF domain profile. 120 178 IPR001471 GO:0003700|GO:0006355
Viun6g02711 247 SUPERFAMILY DNA-binding domain 120 179 IPR016177 GO:0003677
Viun6g02711 247 CDD AP2 119 178 IPR001471 GO:0003700|GO:0006355
Viun6g02711 247 PANTHER DNA-BINDING DOMAIN 99 196 IPR044808 GO:0003700|GO:0009873
Viun6g02711 247 PRINTS Ethylene responsive element binding protein signature 144 160 IPR001471 GO:0003700|GO:0006355
Viun6g02711 247 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Viun6g02711 247 SMART rav1_2 120 184 IPR001471 GO:0003700|GO:0006355
Viun6g02711 247 Pfam AP2 domain 120 170 IPR001471 GO:0003700|GO:0006355
Viun6g02711 247 Gene3D AP2/ERF domain 119 180 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02711 Viun-Chr6 31128227 31129183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02711 12 204 AP2-EREBP Transcription Factor Family AT4G18450 43.878 4.33e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun6g02711 AP2 1.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02711 - - gmx:100820226 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02711 6 31128227 31129183 Viun6g02711 6 31128227 31129183 ECH