Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02700 ATGGGTTCAGGCGATTGGTTTAAGACGATAATTAGCTTAAGAAAATCAAAGAAAGACAGATCAAAGAAAGCAAAGGGTATCTTAGCTCAAGAGAAACTAAATGCATCAAAGTCAAACAATTATACCGGGAAAGAGTCTAGTGATTTAGCAAATGGTATTAAAAGTGAAAACCTTGTTTCACCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTCCGAGCTTATAAGGCTAGAAAGGCTTTACGGCGCGTGAAAGGATTTTCAAAACTGAAGATCCTAACAGAAGGTTTCTCTGTTAAAAAGCAAGCCAGTACAGCTATAACATACCTTCACTCATGGAGCAAGATTCAAGCCGAGATCAGAGATCGTCGAATATGTATGGTAACAGAAGACAGGATCAGGAGGAAGAAACTAGAGTCTCAACTAAAACTGGAAGCAAAACTTCATGATCTGGAGGTTGAATGGTCAGGTGGTTCTGCAACCATGGAGGAAACCCTTGGAAAGATACATCAGAGGGAAGAAGCAGCAGTTAAGCGCGAAAGAGCCATGGCATATGCCTTTTCCCATCAGTGGAGGGCCAACTCTAGTATGAGCCAACTGCTAGGTAGTTATGAACTTAGCAAGGCTAATTGGGGTTGGAGCTGGAAGGAACGGTGGGTCGCCGCTCGGCCTTGGGAAAGTCGCATCTCCGGCGTATCTGTCATCCCAGAGAAAGCTCAACATAAGCAGCCAAGTAAGGTGCAGAAGGATAAGAACACATCAACACCAAAAACTCCTGTCTCAGTTAAACCTCCTTTAGCCATTGCAAAAGGGACTCCTCCTTCTGCCAATGCAAAAGCCAATTCAAAAGCTAGGAGATTGTCTTATCCACCAACTGCCGAGAAAACTGTGATTCAAGAAGTGCAGTGA 924 0.4383 MGSGDWFKTIISLRKSKKDRSKKAKGILAQEKLNASKSNNYTGKESSDLANGIKSENLVSPGVSVETIAATRIQTAFRAYKARKALRRVKGFSKLKILTEGFSVKKQASTAITYLHSWSKIQAEIRDRRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWSGGSATMEETLGKIHQREEAAVKRERAMAYAFSHQWRANSSMSQLLGSYELSKANWGWSWKERWVAARPWESRISGVSVIPEKAQHKQPSKVQKDKNTSTPKTPVSVKPPLAIAKGTPPSANAKANSKARRLSYPPTAEKTVIQEVQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02700 307 PANTHER IQ-DOMAIN 5-RELATED 1 287 - -
Viun6g02700 307 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Viun6g02700 307 MobiDBLite consensus disorder prediction 239 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02700 Viun-Chr6 31060541 31064836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02700 1 295 IQD Protein Family AT2G33990 50.169 3.52e-84 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02700 - - vun:114186748 592.423