Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02669 ATGTCAACTCCTTCATCATCTTCTTCTATTTGGGTGTTGTCTAACATAAAGCTTCAGTTCTTTGCTCGCATCAGACGGTTTCTCCAATCCAAAGCAACCAGAAAGCGTTTTGATCCCTCCGATCGCTTTGACGCGGCTAAGAGCAGAGGTGAACACAACAAGAAGGCTGAAAATATTGGAACAGAACAGGTTATGCAGAAGACTGAAGAGGAGGAGGAAGAAGAAGTCTCTGCGATCATGTTGCAGAGAACTGTGAAGATGCTTCACTTTGGAAGCTGGGAAGAGAAGGAAGTGGCGGCAAAAGAGATTGAAAAGTTAGCCAAGGAAGATGTTAACGTCAGAAAGTTGATAACAGAACTTGGGGTGGTGCCGGTGTTGGTATCTATGGCGGCGTCGCCGGTGGCTAGCCGCCGGCGAGCCGCGTTGACGGCGTTGGTCCACCTGGCTGATGGAACTTACACGAACAAGGCTTTGATAGTTGAGGCAGGAATATTGTGCAAGCTGCCAAAGAATATTGACCTTGTAGATGAATCAACAAGAAGTAAATTGGCAGAGTTGCTTTTGTCTCTGTCATCTCTTGCAAACACTCAGTTCCCTCTTGCTTCGTTAGACTTTCTCCCATTACTTAGACACATTTTTGAGACAGACACATGTTTTGACACCAAACAATCGTGTTTGAGTGCTTTGTATAATCTATCAACTGTTTTAGAGAATGCATCACCTATGGTTTCAAGCGGGGTGGTCCCTATCCTCTTGGAAGCGTCCTCGTTAAAAGAAATTTCAGAGAAAGCACTTGCCACTCTAGGGAACTTGTCAGTGACTTTGATGGGGAAAAAAGCAATAGAGAACAGCACAATGGTCCCAGAAACCTTCATTGATATTTTGTCATGGGAAGATAAGCCTAAATGCCAAGAGTTATCCGTGTATATTTTAATGATTCTAGCACATCAAAGTTCGTTGCAAAGAAAGAAGATGGCAGAGGCAGGGATTGTTCCTGTGCTTCTTGAAGTGGTTTTATTGGGCAGCACTTTGGCTCAAAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAAAGGCAGACTAAGATGGGGCCACATTCTGGTCCACAAACACCAAGATTTGCGATGGGGTCACCTGTAAATCAAAGAGAAGCAAAAGAAGGGAAGAAAATGATGAAGAGTTTGGTGAAACAGAGTCTGCACAGGAATATGGAAATAATAACTCATAGGGCAAACGCTGCAGGGGAGTCTTCTAAATTGAAGTCTTTGATCATCAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1308 0.4365 MSTPSSSSSIWVLSNIKLQFFARIRRFLQSKATRKRFDPSDRFDAAKSRGEHNKKAENIGTEQVMQKTEEEEEEEVSAIMLQRTVKMLHFGSWEEKEVAAKEIEKLAKEDVNVRKLITELGVVPVLVSMAASPVASRRRAALTALVHLADGTYTNKALIVEAGILCKLPKNIDLVDESTRSKLAELLLSLSSLANTQFPLASLDFLPLLRHIFETDTCFDTKQSCLSALYNLSTVLENASPMVSSGVVPILLEASSLKEISEKALATLGNLSVTLMGKKAIENSTMVPETFIDILSWEDKPKCQELSVYILMILAHQSSLQRKKMAEAGIVPVLLEVVLLGSTLAQKRAMKLLQWFKDERQTKMGPHSGPQTPRFAMGSPVNQREAKEGKKMMKSLVKQSLHRNMEIITHRANAAGESSKLKSLIISTSSKSLPY 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02669 435 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 10 435 - -
Viun6g02669 435 SMART arm_5 152 192 IPR000225 GO:0005515
Viun6g02669 435 SMART arm_5 110 150 IPR000225 GO:0005515
Viun6g02669 435 SMART arm_5 193 234 IPR000225 GO:0005515
Viun6g02669 435 SMART arm_5 235 273 IPR000225 GO:0005515
Viun6g02669 435 SUPERFAMILY ARM repeat 85 355 IPR016024 -
Viun6g02669 435 MobiDBLite consensus disorder prediction 39 58 - -
Viun6g02669 435 Gene3D - 57 405 IPR011989 -
Viun6g02669 435 MobiDBLite consensus disorder prediction 39 73 - -
Viun6g02669 435 MobiDBLite consensus disorder prediction 362 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02669 Viun-Chr6 30914945 30917954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02669 94 373 U-box Gene Family AT1G67530 29.617 2.29e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02669 - - gmx:100813828 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02669 6 30914945 30917954 Viun6g02669 6 30914945 30917954 ECH