Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02660 ATGCCCGACTTCAACGACTCCATCGCGCCGCCGTCGCGCCCCGTCCCCGTTCGCGAGGACTGCTGGTCCGAGGAGGCGTCTTCGACTCTTGTTGACGCCTGGGGCCGACGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGATTGGCAGGATGTCGCGGATGCTGTCAACGCGCTCCACGGTCACACCAAGAAGACGCACCGCACAGACGTCCAGTGCAAGAACCGCATCGATACCATAAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGTCCTCCAACGGTACTCTCTCTTCCTCCTGGCCTTTCTACGAACGATTGGATGCTCTGATTGGCCCTAATTTCAACGCCAAGAAGCCTCCTTCCTCCTCGCCGTCTCCTTCGCCACCTGTGGCTCTTCCGTTGCTTCCGCATCGGAAGAACCCTTCCTCCTCGCCTGCGATTGCGGTGACACCCACGGCCGTCGCTCTGCCTCAGAAGCGCTCCGCCGCTGCGGCGGCGATGGATGAGGGTTATTTCAGAAGGAATTACTCCGCTGTTGCAGCGGCTGCGGCGGCTGCGGAGGCTGACGAGGACGAGGAGGAAGAGGAAGAAGAGGAGGCGGACGATGTGGAGGAGGAGGAGGACGAAGATGAAGGAAGGGGGAGCGAGGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGGGAAGTGTATGAGAGAGTGGAGGGTCAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTCCAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGGGAAACGATCTGGCTCTAACGATATGTATAGCTAG 906 0.5795 MPDFNDSIAPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGTLSSSWPFYERLDALIGPNFNAKKPPSSSPSPSPPVALPLLPHRKNPSSSPAIAVTPTAVALPQKRSAAAAAMDEGYFRRNYSAVAAAAAAAEADEDEEEEEEEEADDVEEEEDEDEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMYS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02660 301 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 292 IPR044823 -
Viun6g02660 301 MobiDBLite consensus disorder prediction 187 231 - -
Viun6g02660 301 MobiDBLite consensus disorder prediction 190 220 - -
Viun6g02660 301 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Viun6g02660 301 Coils Coil 183 217 - -
Viun6g02660 301 Gene3D - 22 88 - -
Viun6g02660 301 MobiDBLite consensus disorder prediction 118 150 - -
Viun6g02660 301 FunFam trihelix transcription factor ASIL2 22 88 - -
Viun6g02660 301 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02660 Viun-Chr6 30851989 30857351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02660 18 155 Trihelix Transcription Factor Family AT3G14180 48.276 2.22e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun6g02660 Myb_DNA-bind_4 5.7e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02660 - - gmx:100815241 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02660 6 30851989 30857351 Viun6g02660 6 30851989 30857351 ECH