Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02659 ATGCCCGACTTCAACGACTCCATCGCGCCGCCGTCGCGCCCCGTCCCCGTTCGCGAGGACTGCTGGTCCGAGGAGGCGTCTTCGACTCTTGTTGACGCCTGGGGCCGACGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGATTGGCAGGATGTCGCGGATGCTGTCAACGCGCTCCACGGTCACACCAAGAAGACGCACCGCACAGACGTCCAGTGCAAGAACCGCATCGATACCATAAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGTCCTCCAACGGTACTCTCTCTTCCTCCTGGCCTTTCTACGAACGATTGGATGCTCTGATTGGCCCTAATTTCAACGCCAAGAAGCCTCCTTCCTCCTCGCCGTCTCCTTCGCCACCTGTGGCTCTTCCGTTGCTTCCGCATCGGAAGAACCCTTCCTCCTCGCCTGCGATTGCGGTGACACCCACGGCCGTCGCTCTGCCTCAGAAGCGCTCCGCCGCTGCGGCGGCGATGGATGAGGGTTATTTCAGAAGGAATTACTCCGCTGTTGCAGCGGCTGCGGCGGCTGCGGAGGCTGACGAGGACGAGGAGGAAGAGGAAGAAGAGGAGGCGGACGATGTGGAGGAGGAGGAGGACGAAGATGAAGGAAGGGGGAGCGAGGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGGGAAGTGTATGAGAGAGTGGAGGGTCAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTCCAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGGGAAACGATCTGGCTCTAACGTTCTGCAATTAAATATACCAGCAAGTGGTGCACTTTAG 930 0.5753 MPDFNDSIAPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGTLSSSWPFYERLDALIGPNFNAKKPPSSSPSPSPPVALPLLPHRKNPSSSPAIAVTPTAVALPQKRSAAAAAMDEGYFRRNYSAVAAAAAAAEADEDEEEEEEEEADDVEEEEDEDEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNVLQLNIPASGAL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02659 309 MobiDBLite consensus disorder prediction 187 231 - -
Viun6g02659 309 FunFam trihelix transcription factor ASIL2 22 88 - -
Viun6g02659 309 MobiDBLite consensus disorder prediction 190 220 - -
Viun6g02659 309 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Viun6g02659 309 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 292 IPR044823 -
Viun6g02659 309 Coils Coil 183 217 - -
Viun6g02659 309 MobiDBLite consensus disorder prediction 118 150 - -
Viun6g02659 309 Gene3D - 22 88 - -
Viun6g02659 309 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02659 Viun-Chr6 30851972 30857408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02659 18 155 Trihelix Transcription Factor Family AT3G14180 48.276 2.51e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun6g02659 Myb_DNA-bind_4 6e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02659 - - gmx:100815241 450.669