Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02642 ATGGAACTAAGATGGAACACATTTGGATTTTGTCTGAGAATTTATATTTTCTTGTTCTCACTATGGGGAATCCGAGATTGTTGTTCCGTTAATGATGAAGGACTGGCTTTGTTAGCGTTCCAAGCGAGAATAACTAGTGATCCCTTTAATGCTTTGGTGAATTGGGATCCCAATGATTGTAACCCTTGCGAGTGGTTGGGTGTTCATTGTGTAGATGGTAAAGTGCAAGTGTTGGACTTAAAAGGGTTATCATTGGAAGGGACGTTGGCTCCTGAACTTGGCAAACTTAGTCACCTAAATTCTATATTGAAGCTAGGGAAGACTGCCTCTCATAGCAATGAAGCGGATTATTGTGACATTCTGCCCAGTTCTGATGTGCCAAAGATAGCCCAAAATGTACCAGAAATTGTTAGTTCGACACGTCGTAAGTTACTTCAGTCTAGTGGTAATAACCTTGCAGCTGTACCTTTCAGTGACAAAACACCAATAGAGTTTAGCACTGCTCCAACTACCTTCAGTAGTGGAGCTATTCCTGCTGTTCCAGAAGCCATCGAGAAAAAAAATCGGCCTGCACCCTCAGATCCGGATTCTAATGCTCCTGATGATGCTTCTGATGAAAATCAATCAGACAATGTTTCTGATGAAAATCAATCACAAGATGCTTCCGATGGAAATCAAGCAAGCCAACAACATTTAAATAATGGTGCTTCTACGTGGAAGTGGATAATTATTTTTCTTCTTCTTCTGCTGGTCATTATTATCATAATTCTTTTATACATTTGGCGAAAACGAGCCGCAAAAGTAATACGCCCCTGGAAGACAGGAATAAGTGGACAGTTGCGGAAAGCATTTATAACAGGGGTTCCCAAGTTGGATAGAGGAGAATTAGAGACAGCCTGTGAAGATTTTAGCAATATTGTTGTTGATGGTTATGCCGGGTGCACCATCTACAAAGGAACATTGTCTAGTGGAGTTGAGATTGCTGTAGTTTCTACTCTAGTTACTTCTTCTAAGAATTGGTCAAAGAGCATGGAGCTAAGATACCGCAAAAAGATTGATACTTTGTCTCGCATAAATCATAAGAACTTTGTTAATCTTATTGGCTACTGCGAAGAACAAGAACCATTCACTAGGATGTTGGTGTTTGAGTATGCTCCAAATGGAAACGTGTTTGAGCATTTACATGGTACAACTCTTTGTTTTCGTTTTGCTAGAGAAAAATGGATTTTATCTGTGTTCTTAAAACTAAAAGTTCTGTATGTTTTAGTTGCGGATTTGGAACGTCTTGATTGGAGTGCAAGGATAAAGATTATCATGGGGATTGCGTATTGCCTTCAATACATGCACCATGACTTAAATCCACCTCTGGCACAAAGCAACCTTACTTCAAATATGATATTTTTAACAGATGATTTTTCTGCTAAGGTTGCAGAAGTTACTTTTAGACATATTGTGTCACCAGAGAACTCGGGTGATTCAAAGAAATCTGATGATGGGCCATCCGAAGAGAATATTGAAACCAATATTTACAACTTTGGAGAGTTATTGCTGGAAATCATCTCAGGGAAATTATCTTACTCGGAAGAACATGGCAACCTAGTGGACTGGGCTGCTACGTACTTAAACGAGAAAACAAATCTCAAAGATTTGGTGGATCCCACCCTCCAATGTTTCAAGGAGAACGAACTTAATTGCATTTGTGATGTAATCCAAGATTGTATCCAACCTGATGAAAAGTTAAGACCAACAATGAGGGACGTGACTTCCAAATTAAGGGAAGTGCTTGGTTTGTCACCTGAGCAAGTTGTCCCAAGACTTTCTCCACTCTGGTGGGCTGAATTGGAGATATTGTCAGTGGACTCGACTTAA 1869 0.3975 MELRWNTFGFCLRIYIFLFSLWGIRDCCSVNDEGLALLAFQARITSDPFNALVNWDPNDCNPCEWLGVHCVDGKVQVLDLKGLSLEGTLAPELGKLSHLNSILKLGKTASHSNEADYCDILPSSDVPKIAQNVPEIVSSTRRKLLQSSGNNLAAVPFSDKTPIEFSTAPTTFSSGAIPAVPEAIEKKNRPAPSDPDSNAPDDASDENQSDNVSDENQSQDASDGNQASQQHLNNGASTWKWIIIFLLLLLVIIIIILLYIWRKRAAKVIRPWKTGISGQLRKAFITGVPKLDRGELETACEDFSNIVVDGYAGCTIYKGTLSSGVEIAVVSTLVTSSKNWSKSMELRYRKKIDTLSRINHKNFVNLIGYCEEQEPFTRMLVFEYAPNGNVFEHLHGTTLCFRFAREKWILSVFLKLKVLYVLVADLERLDWSARIKIIMGIAYCLQYMHHDLNPPLAQSNLTSNMIFLTDDFSAKVAEVTFRHIVSPENSGDSKKSDDGPSEENIETNIYNFGELLLEIISGKLSYSEEHGNLVDWAATYLNEKTNLKDLVDPTLQCFKENELNCICDVIQDCIQPDEKLRPTMRDVTSKLREVLGLSPEQVVPRLSPLWWAELEILSVDST 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02642 622 Gene3D Transferase(Phosphotransferase) domain 1 420 601 - -
Viun6g02642 622 PANTHER PROTEIN MALE DISCOVERER 2 15 396 - -
Viun6g02642 622 Pfam Protein tyrosine and serine/threonine kinase 315 591 IPR001245 GO:0004672|GO:0006468
Viun6g02642 622 MobiDBLite consensus disorder prediction 186 230 - -
Viun6g02642 622 FunFam Inactive receptor-like serine/threonine-protein kinase 275 384 - -
Viun6g02642 622 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Viun6g02642 622 Gene3D Ribonuclease Inhibitor 33 180 IPR032675 -
Viun6g02642 622 SUPERFAMILY L domain-like 29 101 - -
Viun6g02642 622 Gene3D Phosphorylase Kinase; domain 1 279 384 - -
Viun6g02642 622 ProSiteProfiles Protein kinase domain profile. 301 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02642 622 MobiDBLite consensus disorder prediction 210 230 - -
Viun6g02642 622 SMART tyrkin_6 306 591 IPR020635 GO:0004713|GO:0006468
Viun6g02642 622 SUPERFAMILY Protein kinase-like (PK-like) 315 591 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02642 Viun-Chr6 30779929 30785421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02642 295 595 Receptor kinase-like Gene Family AT3G59420 29.560 1.28e-31 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Viun6g02642 PK_Tyr_Ser-Thr 6.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02642 - - vun:114189247 1123.61