Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02641 ATGGCCAACCCTGCGGTGCAAAGATTCTCTGAGTTCCACGAGAAGTGGAACGAGAAGCTTGAGGATATTCTCCAACAGCTTACCCAGGTGTCCGACCAGAGAACCGAGGTGGTCAAGACTGAGGAAGAGCTGCTAGCTTTGGTGTCGACGGTGACGACCCATTTGAAGGAATACTACAACACCAAATGGGCTGCTGCTGGAACGGAGAACGTTCTGATTTTCTTTTCTCCGCCCTGGATGAACCCTTTGGAGCATGCTCAGCTTTGGATGACGGGGTGGAAGCCGTCCACCGTGTTCAGGCAGCTGGAGAATCTGAAGAAAAAGGGGAACGTTTTCGTGATGACTGAGGAGCAGGAGAAGAGGATGGAGGACCTGAAGGTGCGGGTAAGGATGGAGGAGGACAAGGTGGAGAGGGAGATGGAGAGACAGCATGTGGCCATGGCGGACCGCAAGATGGTGCAGCTGTCCAAGATCTCGACGAGCCGCCCAAGTCGCGGTGGGCCGAATTCTGTTACCGAGGTGGCAGTGAAGGAGGTTGTTGTAGGGTTGGAGAGGGTGATGAAGGCTTCCGATTGCGTGAGGCTCAAGACACTCAAAGGGGTGCTGGATTTGCTTAGTCCAATGCAGGGTGTGGACTTCTTGGCAATGAATATAACTACGCAGCTGCGATTCAGACAATGGGGGACGAAGAAGAAGGACACGGCTGGGACCGCGCTCAATGGGAATCAAGACAAGTGA 738 0.5393 MANPAVQRFSEFHEKWNEKLEDILQQLTQVSDQRTEVVKTEEELLALVSTVTTHLKEYYNTKWAAAGTENVLIFFSPPWMNPLEHAQLWMTGWKPSTVFRQLENLKKKGNVFVMTEEQEKRMEDLKVRVRMEEDKVEREMERQHVAMADRKMVQLSKISTSRPSRGGPNSVTEVAVKEVVVGLERVMKASDCVRLKTLKGVLDLLSPMQGVDFLAMNITTQLRFRQWGTKKKDTAGTALNGNQDK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02641 245 Pfam Seed dormancy control 24 102 IPR025422 GO:0006351|GO:0043565
Viun6g02641 245 ProSiteProfiles DOG1 domain profile. 6 234 IPR025422 GO:0006351|GO:0043565
Viun6g02641 245 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 238 - -
Viun6g02641 245 Coils Coil 13 33 - -
Viun6g02641 245 Coils Coil 115 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02641 Viun-Chr6 30777156 30778114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02641 2 223 bZIP Transcription Factor Family AT5G06960 24.569 3.44e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02641 - - pvu:PHAVU_006G175000g 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02641 6 30777156 30778114 Viun6g02641 6 30777156 30778114 ECH