Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02638 ATGAAGCCCTTTTCCACGTTCTTTATTCTCCTTTCACTGCTTGCGCTCGTGGACTCTAAATATTATTCATGCAAAAATGAAGACCAGGAGCTGGTGTCAAAGGCGTTTCAATCTGTGTCTGGATTCAACTCTTCCTGGTTCCAAAGCGCTTCTAATTGTTCAAATGCTGCTGTTATTAAAAGACTAAATCTTTCCTTCAGGAACCTAAGTGGAAGCATTTCGTGGAAGTATCTGAGGAACATGTCCAAGTTGGAGGTTCTAGATCTGTCTGGGAATTTCTTACAAGGGCAGGTACCAAACTGGTTGTGGACAACCTCATCCTTATCGGTAGTGAACCTTTCTCAGAACAGGTTCGGAGGGAGCATTAACCCCACATCCCAAAACGGTTCCTTTTCATCGCTGAAAAATCTCAATCTCTCATACAACAGGTTCACCAACCAGCTTCACCTCTCTGTTTTTAAAAACCTCAAAAGCCTCGACCTTTCACACAACAACCTCAGAACTTTACCTTTAGGGTTCCAAAACCTCACCAATCTACAATACCTTAATCTCTCCGACTGCAACATCAAAGGTAGCGTAAAACCCATTTCCACCCTAACCTCACTATCCTTCTTGGACCTTTCAAACAACTCTTTGAACGGTAGCTTCCCCTCGGACTTCCCTCCCTTGAAGACCATACAATTCTTGAACATCTCCCACAACAACTTCAAAGCATCCACCGCATTAGACAGATTCAAAAAGTTCGGCAAATCGGCGTTCATTCACGCTGGTAATAACTTCAGCTACACCGCATCCAAAACGCCAAAGCTAGGTGCAACCTGGACATCAGCTTCAACTTCAACCCCACCACATGAACGGTCCCACCACATCCAGGCGGAGAAGAAGAGGCCGAGAGAAAAGCAAAAGTCAAAACAGAAACCAAGAAGCATGATTGCGGCCTTGTCGTGTGCCTCGGCACTCGTGGTTGTCGGACTGTGCATGTGCGTTGTGTGGCGTTGCAGAAGGAAGAGGCAATGGGCAAAAAAGAACAAGTGGGCGATCTCTAAGCCGGTCCCAGTGAACGTGAAGATGGAGAAATCGGGACCCTTCGCATTCGAGACAGAATCAGGGACATCATGGGTGGCTGACCTGAAAGAACCCTCTTCCGCACCCGTGGTCATGTTCGAGAAGCCTCTCATGAACCTCACCTTCGTGGACCTCATTTCTGCCACGTCACACTTTGGCAAGGACTCTCTCCTGGCTGAGGGCAGGTGTGGGCCCGTGTACCGCGCTGTCTTAACCGGAGACATCCACGTGACAATCAAAGTCATCGAAAACGCCAGAGACGTCCATCATGATGACGCTGTCGCTCTCTTCGTTGACCTTGCTCAACTCAAACACCCCAATCTCTTGCCCCTCTCTGGTTACTGTATTGCAGGGAAGGAGAAGCTGGTGTTGTACGAGTTTATGTCCAACGGTGATTTGGGTAGGTGGTTGCAGGAACTACCGGCGGGGGAGACTAATGTCGAGGATTGGAGCGGTGACACATGGGAGATTATTCAAAACGGCGCCGTTTCTCGAGCATCGCCGCCGGAAAAGATGGGCTGGCCAATACGCCACCGTATTGCGGTGGGCGTAGCGCGTGGATTGGCGTTTCTGCACCACGCGGGGTCAAGGCCCGTCGTTCACGGCCATCTCGTCACCTCCAACGTCCTTCTCGGCGACGACTTCGAGCCGCGAATCGCGGATTTCGGGTTCCGAAAGTTTGGAAGGGAGAGCGCTGCCGCCGCGACGAACTGCTCGACGGAGACGGATGTTTACTGCTTCGGTGTGGTGCTTATGGAGCTTCTGACGGGGAGGGGCGGCACGGCGGAGACGGTGGTTTGGGTGAGGAAGGCGGTAAGGGAGGGACACTCTGTGAAGGCGCTGGATGAGAGACTTAAACTCGGCGGCGGCGGCGGCGGCGACTCGGAGAGTGAGATGGTGGAGAGCCTCCGAGTAGCGTATCTGTGTACGGCGGAGTCACCCGGAAAGAGGCCCACGATGCAGCAGGTATTGGGCCTGCTCAAAGATATTCACCCGAGTAACGGACTCGACTGA 2079 0.5176 MKPFSTFFILLSLLALVDSKYYSCKNEDQELVSKAFQSVSGFNSSWFQSASNCSNAAVIKRLNLSFRNLSGSISWKYLRNMSKLEVLDLSGNFLQGQVPNWLWTTSSLSVVNLSQNRFGGSINPTSQNGSFSSLKNLNLSYNRFTNQLHLSVFKNLKSLDLSHNNLRTLPLGFQNLTNLQYLNLSDCNIKGSVKPISTLTSLSFLDLSNNSLNGSFPSDFPPLKTIQFLNISHNNFKASTALDRFKKFGKSAFIHAGNNFSYTASKTPKLGATWTSASTSTPPHERSHHIQAEKKRPREKQKSKQKPRSMIAALSCASALVVVGLCMCVVWRCRRKRQWAKKNKWAISKPVPVNVKMEKSGPFAFETESGTSWVADLKEPSSAPVVMFEKPLMNLTFVDLISATSHFGKDSLLAEGRCGPVYRAVLTGDIHVTIKVIENARDVHHDDAVALFVDLAQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLQELPAGETNVEDWSGDTWEIIQNGAVSRASPPEKMGWPIRHRIAVGVARGLAFLHHAGSRPVVHGHLVTSNVLLGDDFEPRIADFGFRKFGRESAAAATNCSTETDVYCFGVVLMELLTGRGGTAETVVWVRKAVREGHSVKALDERLKLGGGGGGDSESEMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPSNGLD 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02638 692 SUPERFAMILY L domain-like 52 239 - -
Viun6g02638 692 FunFam Putative LRR receptor-like serine/threonine-protein kinase 368 482 - -
Viun6g02638 692 FunFam Calmodulin-binding receptor kinase CaMRLK 132 242 - -
Viun6g02638 692 Gene3D Transferase(Phosphotransferase) domain 1 514 690 - -
Viun6g02638 692 ProSiteProfiles Leucine-rich repeat profile. 155 177 IPR001611 GO:0005515
Viun6g02638 692 PRINTS Leucine-rich repeat signature 156 169 - -
Viun6g02638 692 PRINTS Leucine-rich repeat signature 199 212 - -
Viun6g02638 692 ProSiteProfiles Leucine-rich repeat profile. 178 200 IPR001611 GO:0005515
Viun6g02638 692 Pfam Leucine rich repeat 60 118 IPR001611 GO:0005515
Viun6g02638 692 Pfam Leucine rich repeat 133 189 IPR001611 GO:0005515
Viun6g02638 692 Gene3D Phosphorylase Kinase; domain 1 367 482 - -
Viun6g02638 692 Pfam Protein tyrosine and serine/threonine kinase 411 679 IPR001245 GO:0004672|GO:0006468
Viun6g02638 692 SMART LRR_typ_2 81 105 IPR003591 -
Viun6g02638 692 SMART LRR_typ_2 199 222 IPR003591 -
Viun6g02638 692 SMART LRR_typ_2 153 175 IPR003591 -
Viun6g02638 692 SUPERFAMILY Protein kinase-like (PK-like) 384 683 IPR011009 -
Viun6g02638 692 Gene3D Ribonuclease Inhibitor 31 127 IPR032675 -
Viun6g02638 692 MobiDBLite consensus disorder prediction 273 307 - -
Viun6g02638 692 Gene3D Ribonuclease Inhibitor 128 265 IPR032675 -
Viun6g02638 692 ProSiteProfiles Protein kinase domain profile. 407 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02638 692 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 48 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02638 Viun-Chr6 30750757 30753429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02638 58 685 Receptor kinase-like Gene Family AT5G07280 29.569 3.42e-68 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Viun6g02638 PK_Tyr_Ser-Thr 3.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02638 - - gmx:100778920 1140.56