Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02632 ATGGATCAAAACATAAGCGAAGAAAGAGGTGAGATACTGGGTCCGGTTCATGAAGGGGTAGATGGAAATTCGAGTCATTTGGTTGAAGGGGTAGTTATTGATGCAGTAGATGGGAACAACTTGGGTGGCAGAGTTGGTATAAGGGGAGAAGCTGCAACTTCAAGAGAGATGCGTAAGGATTTGGGATCTGAAAAGGAGCTAAAGGAGGAGCTTGAGGAAGTTAAGGGTCAGGACATGCATGGTCAAGAAAATATCAGTTATAATAAATTGCTTGGGGTTGATCAGGGAACTAGTTATAATCCAAACCATTTGGTTAATCAGGAAGTGATTGAAACTGTGGTTGTAATCGAGTCTTTTGAGACTGAGTATGTGAATGAGAATAATAGGAAGTTGGAAGCAGAAGTTAATGAATCGGGGTTGAACTTTACATCCATGAAAGTACCAGAAGGGGCGTCTGAAACTGATAAAAATTCATGTGTGATTGATATAAAATGCAGCAGCCGCAAAAAGTTTTCTGAGAATTCTGAAGGTGAACAGATTTGTAGGATTTGCCATCTGGCTTCTGTGCAACCATCGGATGAAAATGAAGCAACTGTTGGCCCTGCTGCTAGTAGTGCTATGTTTTCAGATTTGATTCAGCTTGGTTGTGCATGTAAAGATGAGCTAGGCATTGCACATGTTCATTGTGCTGAGGCGTGGTTCAAGCTTAAGGGGAACAGGTTATGTGAAATATGTAGTGAGACTGCAACAAATGTATCGGGTGTTAGTAATTACGAATTTATGGAAAAGTGGAATGAAAGAAGGTTCATGGAAGACGGTGGCAACTCATCCCGCAGGTTTGGTGGATGCTCTCCAGGACAACCATTTTGTAACTTCTTGATGGCATGCCTGGTAATAGCATTTGTTCTGTCATGGTTTTTTCGTGTAAATGTGTTCTAG 939 0.4143 MDQNISEERGEILGPVHEGVDGNSSHLVEGVVIDAVDGNNLGGRVGIRGEAATSREMRKDLGSEKELKEELEEVKGQDMHGQENISYNKLLGVDQGTSYNPNHLVNQEVIETVVVIESFETEYVNENNRKLEAEVNESGLNFTSMKVPEGASETDKNSCVIDIKCSSRKKFSENSEGEQICRICHLASVQPSDENEATVGPAASSAMFSDLIQLGCACKDELGIAHVHCAEAWFKLKGNRLCEICSETATNVSGVSNYEFMEKWNERRFMEDGGNSSRRFGGCSPGQPFCNFLMACLVIAFVLSWFFRVNVF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02632 312 MobiDBLite consensus disorder prediction 1 15 - -
Viun6g02632 312 MobiDBLite consensus disorder prediction 1 20 - -
Viun6g02632 312 SUPERFAMILY RING/U-box 176 248 - -
Viun6g02632 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 164 257 IPR013083 -
Viun6g02632 312 Pfam RING-variant domain 181 245 IPR011016 GO:0008270
Viun6g02632 312 Coils Coil 116 136 - -
Viun6g02632 312 PANTHER ZINC FINGER, RING-CH-TYPE 76 312 - -
Viun6g02632 312 SMART ringv_2 180 246 IPR011016 GO:0008270
Viun6g02632 312 ProSiteProfiles Zinc finger RING-CH-type profile. 173 252 IPR011016 GO:0008270
Viun6g02632 312 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02632 Viun-Chr6 30723410 30726412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02632 161 311 C3H Transcription Factor Family AT5G05830 39.103 1.31e-26 102