Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02620 ATGAAGAGTGCTTGTGATGAATGGAAGCCTTTTGTAGTAATGATAGCAATTGATTTTTCTTTTGCTCTAGTGAATATTCTTCTCAAGAAAGTCCTTGAAGAAGGGGTGAACCATTTGGTTTTCATCACATACCGGTTGACAATTGCTACCATTTTCATAGCTCCAATCGCCTACTTTAGAGAAAGAAACGACAGACCAAGGCTCACATTTCGAACTTTATGTTACCTATTCTGCAGTGCCATTGTTGGGGCATCAGTCACTCAATACTTTGTCCTTCTGGGGATCCAATATACTTCTGCTACCTTCTCTTGTGCTTTCATCAACATGGTGCCAGTGCTCACATTCATGATGGCATTACCTTTTGGATTAGAGACTGTGAAAATCAAATGCAACAGTGGGAGAGCTAAGATTCTTGGTTCATTGGTGTGCATAGGTGGCGTATTGATTTTGACACTTTACAAAGGAAAGCCACTGTTTAATTTTTCTCACTACGAATCCGCAGCTTCTATGGTCAAGAGTTCTGCAGCGAATGCATATTCTACAAAGACAACGGAGAGATGGACTATTGGTGTAATAGCCATGGTTATAGGAACCATGTTTTGGTCTTCTTGGTATATTTTACAGTCAAAAATAAGCAAGAGTTATCCATGCCAGTATTCTAGCACAGCCATCATGAGCTTCTTTGGAGCTCTTCAATCAGCTGTTATTTGCTTGTGCACTGACCACAACTTGTCCATTTGGGTTCTCAAGGGAAAGATACAAATCATTGCTTTTCTATATTCTGGGATAATAGGATCAGGTTTGTGTTTTGTGGGAATGTCATGGTGTGTGAAGAAGAGGGGTCCTGTCTTTACTGCAGCATTCAGTCCTCTTGTTCAGATAATTGCAGCAATGATTGATATACCTTTCTTGCATGAACAGCTCCATCTTGGAAGTGTGATGGGATCCATCGTGGTGATTATTGGATTATACATTCTTCTATGGGGAAAGACCGTGGAAATAAAGAATCGTGTGACAAAGTTAGTCCAAGAAGCTGAAGAAACCAAGGAACAAGAGCCGCAGCCACAAATACAACAGTTGACAGTTTATGTCCACACAGAATCGTGTAATTCGTAG 1116 0.405 MKSACDEWKPFVVMIAIDFSFALVNILLKKVLEEGVNHLVFITYRLTIATIFIAPIAYFRERNDRPRLTFRTLCYLFCSAIVGASVTQYFVLLGIQYTSATFSCAFINMVPVLTFMMALPFGLETVKIKCNSGRAKILGSLVCIGGVLILTLYKGKPLFNFSHYESAASMVKSSAANAYSTKTTERWTIGVIAMVIGTMFWSSWYILQSKISKSYPCQYSSTAIMSFFGALQSAVICLCTDHNLSIWVLKGKIQIIAFLYSGIIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIIAAMIDIPFLHEQLHLGSVMGSIVVIIGLYILLWGKTVEIKNRVTKLVQEAEETKEQEPQPQIQQLTVYVHTESCNS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02620 371 Coils Coil 331 351 - -
Viun6g02620 371 PANTHER WAT1-RELATED PROTEIN 9 334 IPR030184 GO:0016020|GO:0022857
Viun6g02620 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 330 - -
Viun6g02620 371 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Viun6g02620 371 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020
Viun6g02620 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02620 Viun-Chr6 30680522 30683063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02620 8 261 Nodulin-like Gene Family AT3G30340 48.425 1.10e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02620 - - gmx:100803670 662.144