Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02602 ATGAGAATCAATTCGGAGCCAAGTGCTGCCAAAATGAAGCACAAGGCAAAGCCTAGTAGTTCACCTCAATATTTCTGTGAGATTGGCGATAGATGTTGTGTAAAGGAAGATGGTGATTTCTGTAGACAACCTTTAAATGAAGAGAGTTGTGAGGATAAGAAGAATAAAGATATTGATGAGAGTGTGATTCCATCCTCAAGTTGCTTTGCTGCTACAACGAATGCTAAAGAAACAAAGTTGTTGGATGATGGGAAGGTTTCAACGAATAGAGTGAAGGAATATGAAAACTTAAGGAAGAGATTTGAGAGGAAAGCAAAAGAGGCTTTTCAAGACCAACTCTTGACACTTGAAAGACAAGTTGAGGAACTTAAGTTTGGATCCAGTAAAGCAGTGGAAAAAGATGTGTTGCAATTTGAATCACCTAGAACAATTTGCACCCCAAGAACACACGCTTTTTCATCTTCAGCAATTTCAAGGAATCCCATCCTTGGAAATGTTATAGAAAATTTTGAGAAAAATGAAAAGCTGTCTCACAAGAAAACCAGTTCCGAGAGGCAGAACTTGAAACAAACTGAGGAGACGAAGGTAAAGACCAACAGGAATAAGCAATCACATAATCTCAACAGAGAACATCAGAGGAGGAAACCAAAGCCGAGCTCTAGAGTCAAAATACATTCTCCAAGGATGGTTTCTAAGGTTGAAATTTGCAAAATAAAGGCCCTGGAAGACGTGAAGAAAGCAAAACTAAAGATGAAGAAAGAAAAGGAGGAGATTGTAGAGGTACCAGAATTAGAGAGCTTTGCTGTGATTAAGTCTTCAATAGATCCAAAGCAAGATTTCAGAGATTCAATGATTGAGATGATCATAGAGAATCAGATTATTCAGCCAGAAGAAATGGAAGATCTTTTGGCATGTTATCTGACTTTGAATGCAGATGAGTATCATGATCTCATCATCAAAGTGTTCAGAAAGGTATGGTTTGACATGAGCCAAGGTATTTTGGGTATTAAACTAAATATGCAATGTGGTTACTATGAATAA 1041 0.3756 MRINSEPSAAKMKHKAKPSSSPQYFCEIGDRCCVKEDGDFCRQPLNEESCEDKKNKDIDESVIPSSSCFAATTNAKETKLLDDGKVSTNRVKEYENLRKRFERKAKEAFQDQLLTLERQVEELKFGSSKAVEKDVLQFESPRTICTPRTHAFSSSAISRNPILGNVIENFEKNEKLSHKKTSSERQNLKQTEETKVKTNRNKQSHNLNREHQRRKPKPSSRVKIHSPRMVSKVEICKIKALEDVKKAKLKMKKEKEEIVEVPELESFAVIKSSIDPKQDFRDSMIEMIIENQIIQPEEMEDLLACYLTLNADEYHDLIIKVFRKVWFDMSQGILGIKLNMQCGYYE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02602 346 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 128 330 IPR038933 GO:0045892
Viun6g02602 346 MobiDBLite consensus disorder prediction 175 224 - -
Viun6g02602 346 Coils Coil 91 111 - -
Viun6g02602 346 NCBIfam uncharacterized plant-specific domain TIGR01568 267 329 IPR006458 -
Viun6g02602 346 ProSiteProfiles OVATE domain profile. 269 328 IPR006458 -
Viun6g02602 346 MobiDBLite consensus disorder prediction 1 22 - -
Viun6g02602 346 MobiDBLite consensus disorder prediction 207 222 - -
Viun6g02602 346 Pfam Transcriptional repressor, ovate 273 329 IPR006458 -
Viun6g02602 346 MobiDBLite consensus disorder prediction 175 206 - -
Viun6g02602 346 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02602 Viun-Chr6 30558642 30559682 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun6g02602 Ovate 1.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02602 - - gmx:102666239 434.491