Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02564 ATGGCAATTAAGAGAACTAATTCAGCAACTTACTTCTTACTTTTTCTCCACCTTCTCCTTCCCTTGGCCTCATGCAGCAACAGGAAGCAGGTTTATGTAGTTGAGTTGTTCCGAGATCACAGCATTCATAGTGATAAAACAGATGAAGTTGAGAATACCCATCACGCTTTTTTGCTTTCTGTTAAAGAAACTGAGGAGGAAGCACGAGCTTCCCTTCTTTATAGTTACAAACACAGTATCAATGGTTTTGCAGCATTGCTTACCCCAAAAGAAGCCAATGAGCTCTCAGAAATGGAGGGAGTGGTTTTTGTGCATAAGAACCAGCCAAAGATCTACTCTTTGCACACCACCAGATCATGGGAATTCGTGGGATTGGATACGCCTTTGAATCCATGGAAAGAAAACTCAGATCAGAAAAATGGAGACTTGCTAAGCAGAGCACAATATGGGAAAGATATCATAGTAGGAATGATTGATAGTGGTGTGTGGCCAGACTCACTGAGCTTCAGTGATGAAGGAATGGAGCCTGTTCCGACGAAATGGAAAGGAGAATGCCAAAATGGAACTGCTTTCGATTCATCTCGATGTAATAGGAAGATTATAGGAACTCGTTACTACTTGCGCGGTTACGAGAGTGCATTTGGCCCTCTAAACGAAAAAGAGGACTACAGATCAGCACGTGACAAAGATGGTCATGGAACACACACGGCTTCAATAGTTGCAGGGCGTGCAGTGGCGAATGCCTCAGCCCTAGGAGGGTTTGCGAAGGGCACTGCCCTAGGTGGGGCCCCTTTGGCCCGTCTTGCCATATACAAAGCATGTTGGCCCATTAAGGGAAAGTCGAAAGACGAGGGGAACGTATGCACAAACATTGACATGCTGAAAGCTATAGATGATGCCATTGGTGATGGCGTTGATGTTCTGAGCATTTCCATTGGGTTCAGTGAACCCCTTTCTTATGAGGAGGATGCGATTGCTAGGGGTGCATTGCATGCTGTGAGGAACAACATTGTTGTAGTGTGCAGTGCAGGTAACGCTGGCCCTTCACCTCAAACTTTGTCAAACCCTGCACCATGGATCATCACTGTTGGTGCCAGCACTGTCGATCGCTCCTTTCTTTCTCCTGTTAAGCTCGCCAATGGCACACTCATTGAGGGTCGATCGATTACCCCAGTTAACATGGGAAACAACTCTTACCCATTGGTTCTAGCTAAAGATGTTGAACTTCCAGGCCTGCCTAGTAATAATTCTGGGTATTGCTTGGACAATACCCTTGAACCTAACAGGACAAGGGGGAAGATAGTTATCTGCCTCAGAGGACAAGGTGGAAGGTTAAAAAAAGGCTTAGAAGTTCAAAGGGTTGGGGGAATTGGTCTCATCCTTGGGAACAATAAACTAAATGGAAATGATGTACCCTCTGATCCTCATTTTATTCCAGCCACTGGACTGTCCTATGATAATGTCTTAAAACTCATTGACTATGTCCATTCTACCCCAAATCCAATGGCACAAATTCTGCCAGGAACAACAGTGTTGAAAACCACACCAGCACCCTACATGGCCTCTTTCTCTAGCAGGGGTCCAAATATAATTGACCCTAATATTCTCAAGCCTGATATTACAGCCCCAGGAGTAGACATATTAGCAGCATGGACCGCGGAAGATGGCCCCACACGAATGACATTTAACGACAAACGAGTGGTTAAGTACAACATCTTCTCTGGAACTTCAATGTCATGCCCTCATGTTGCTGCTGCAGCTGTTCTTCTCAAAGCCATACACCCTACTTGGACCACTGCTGCTATAAGATCTGCTCTCATCACTACAGCCATGCCAACGGACAACACTGGTCATCCATTGATTGATGAAGCTGGAAATCTTGCAACACCTTTTGCAATGGGATCTGGGCACTTCAACCCCAAAGGAGCAGCAGATCCTGGTCTAGTTTATGATGCCTCCTACACGGACTACCTTCTTTACACTTGTAAACTTGGAGTGGCTAAAAACCTCAACATTACCTTTAACTGTCCAAAGTCGTTTCTTGAACCCTTTGAACTCAACTATCCATCCATACAAATCCATGGACTCAATTACTCTAGGACTATTAAGAGGACAGTCACCAATGTTGGTGGGAGCAAGAGTATTTACAAGTTTAGTGCCTCGTCATCAAAGGAATTCTCCATCACAGCCACTCCAGATACTCTTACATTTAATCATGTTGGGCAGAAAATGAACTTCATCATCACAGTGACAGCAAACTCGAGTCAGATACCAACCAACCATGGCCCAGATAAGTACTACTTTGGTTGGTATGCATGGACTCGAGAACATGTCGTTGTAAGAAGCCCACTGGCAGTGTCTTTTATATAG 2370 0.4485 MAIKRTNSATYFLLFLHLLLPLASCSNRKQVYVVELFRDHSIHSDKTDEVENTHHAFLLSVKETEEEARASLLYSYKHSINGFAALLTPKEANELSEMEGVVFVHKNQPKIYSLHTTRSWEFVGLDTPLNPWKENSDQKNGDLLSRAQYGKDIIVGMIDSGVWPDSLSFSDEGMEPVPTKWKGECQNGTAFDSSRCNRKIIGTRYYLRGYESAFGPLNEKEDYRSARDKDGHGTHTASIVAGRAVANASALGGFAKGTALGGAPLARLAIYKACWPIKGKSKDEGNVCTNIDMLKAIDDAIGDGVDVLSISIGFSEPLSYEEDAIARGALHAVRNNIVVVCSAGNAGPSPQTLSNPAPWIITVGASTVDRSFLSPVKLANGTLIEGRSITPVNMGNNSYPLVLAKDVELPGLPSNNSGYCLDNTLEPNRTRGKIVICLRGQGGRLKKGLEVQRVGGIGLILGNNKLNGNDVPSDPHFIPATGLSYDNVLKLIDYVHSTPNPMAQILPGTTVLKTTPAPYMASFSSRGPNIIDPNILKPDITAPGVDILAAWTAEDGPTRMTFNDKRVVKYNIFSGTSMSCPHVAAAAVLLKAIHPTWTTAAIRSALITTAMPTDNTGHPLIDEAGNLATPFAMGSGHFNPKGAADPGLVYDASYTDYLLYTCKLGVAKNLNITFNCPKSFLEPFELNYPSIQIHGLNYSRTIKRTVTNVGGSKSIYKFSASSSKEFSITATPDTLTFNHVGQKMNFIITVTANSSQIPTNHGPDKYYFGWYAWTREHVVVRSPLAVSFI 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02564 789 CDD Peptidases_S8_3 112 610 IPR034197 -
Viun6g02564 789 FunFam subtilisin-like protease SBT1.5 369 512 - -
Viun6g02564 789 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 65 786 IPR045051 -
Viun6g02564 789 ProSiteProfiles Serine proteases, subtilase domain profile. 131 644 - -
Viun6g02564 789 Gene3D - 660 788 - -
Viun6g02564 789 Pfam PA domain 400 490 IPR003137 -
Viun6g02564 789 Gene3D Peptidase S8/S53 domain 152 657 IPR036852 GO:0004252|GO:0006508
Viun6g02564 789 Pfam Peptidase inhibitor I9 31 108 IPR010259 -
Viun6g02564 789 Pfam Fibronectin type-III domain 685 786 IPR041469 -
Viun6g02564 789 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
Viun6g02564 789 Gene3D - 369 512 - -
Viun6g02564 789 CDD PA_subtilisin_like 376 505 - -
Viun6g02564 789 ProSitePatterns Serine proteases, subtilase family, serine active site. 575 585 IPR023828 -
Viun6g02564 789 FunFam Subtilisin-like protease SBT1.5 152 382 - -
Viun6g02564 789 SUPERFAMILY Subtilisin-like 116 648 IPR036852 GO:0004252|GO:0006508
Viun6g02564 789 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Viun6g02564 789 PRINTS Subtilisin serine protease family (S8) signature 150 169 IPR015500 -
Viun6g02564 789 PRINTS Subtilisin serine protease family (S8) signature 574 590 IPR015500 -
Viun6g02564 789 Pfam Subtilase family 150 618 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02564 Viun-Chr6 30268812 30275420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02564 23 788 Subtilisin-like Serine Gene Family AT5G45650 55.327 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02564 - - gmx:100793064 1353.58