Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02558 ATGGTTGTGGAAGATTCACAAAAATCAACTATCACCGATGACCAAAACCCTAGCAGGGTCGACAACGACGACGAAGATCTTGAAGATGGGGAGATCCTCGAAGATGCCGACGACGCCGCCTCCGCCGCCTCCAAGCCTCCGTCCGCACTCCTCCGCAACCCCCACCCTCTCGAGAATTCCTGGACCTTCTGGTTCGACAACCGTTCCGCCAAGTCCAAACAAGACGAATGGGGCAGTTCCATCCGACCTATATACACCTTCGCCACCGTCGAAGAGTTTTGGAGCATTTACAATAACATTCACCATCCGAGCAAGTTGGGTGTGCGGGTGGACTTTCACTGCTTCAAGTATAAGATCGAGCCCAAATGGGAGGACCCTATCTGCGCCAATGGTGGAAAATGGACTATGACTTTCCAAAGGGGAAAATCTGATACCAGTTGGTTGTATACGTTGTTGGCAATGATTGGAGAACAGTTTGATCACGGAGATGAAATCTGTGGAGCTGTTGTGAATGTCAGAAATAGGCAGGATAAAATTTCTATTTGGACTAAGAATGCTTCAAATGAAGCTGCTCAGATGAGCATTGGAAAGCAGTGGAAGGAGTTTCTTGATTACAATGAGACAATAGGCTTTATATTTCATGAGGATGCAAAGAAGCATGAGAGGGGTGCTAAAAATAAATACGTGATATGA 693 0.469 MVVEDSQKSTITDDQNPSRVDNDDEDLEDGEILEDADDAASAASKPPSALLRNPHPLENSWTFWFDNRSAKSKQDEWGSSIRPIYTFATVEEFWSIYNNIHHPSKLGVRVDFHCFKYKIEPKWEDPICANGGKWTMTFQRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRNRQDKISIWTKNASNEAAQMSIGKQWKEFLDYNETIGFIFHEDAKKHERGAKNKYVI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02558 230 MobiDBLite consensus disorder prediction 1 53 - -
Viun6g02558 230 FunFam Eukaryotic translation initiation factor 4E 47 230 - -
Viun6g02558 230 Gene3D RNA Cap, Translation Initiation Factor Eif4e 48 230 IPR023398 -
Viun6g02558 230 MobiDBLite consensus disorder prediction 1 16 - -
Viun6g02558 230 ProSitePatterns Eukaryotic initiation factor 4E signature. 111 134 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Viun6g02558 230 MobiDBLite consensus disorder prediction 19 36 - -
Viun6g02558 230 SUPERFAMILY eIF4e-like 51 225 IPR023398 -
Viun6g02558 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 22 220 IPR001040 GO:0003723|GO:0003743|GO:0006413
Viun6g02558 230 Pfam Eukaryotic initiation factor 4E 56 208 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02558 Viun-Chr6 30240199 30242476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02558 1 229 Eukaryotic Initiation Factors Gene Family AT4G18040 61.633 3.12e-108 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02558 K03259 - gmx:100793288 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02558 6 30240199 30242476 Viun6g02558 6 30240199 30242476 ECH