Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun6g02551 | ATGGCACACAACACCGACATGCCACCTTCTTCTACGTCACCTCAACACCATGAAAGAGACAATGACAACCAGAAGGTTCCCTTCTACAAGCTATTCACTTTTGCAGATCATCTTGACGTGGCCTTCATGGCCATTGGCACAATCTCTGCCATGGCTAATGGCTGGTCGCAGCCTATCATGTCTGTCATTGTAGGAAAGCTTATCAACACCTTTGGCTCCACCGATCCATCAAATACCATCAAAGAGGTTTCTAAGGTTTCGTTATTATTTGTATACTTGGCTATTGCGAGTGGAGTTGCCTCGTTTCTCCAGGTAACATGTTGGATGGTGACAGGAGAAAGACAAGCTGCGAGGATTCGAGGTTTGTACTTGAAAACTATATTGAAGCAGGACATTGCTTTCTTTGACACTGAGACAACAACTGGTGAGGTTATTGGGAGAATGTCTGGTGACACTATTCTCATTCAAGATTCCATGGGAGAAAAGGTTGGGAAGTTTATACAACTTGCTTCAACTTTTATTGGTGGCTTTGTGATTGCCTTTGTAAGAGGATGGCGACTTACTGTTGTTTTGGTCGCATGTATACCATGTATTGTTGTTACTCGTGGAATTCTGTCCGTGTTGATGAGTAGAATGTCAAGTCGTGGCCAAGCTGCTTACGCAGAGGCAGGAACTGTGGTTGAACAAACAGTGGGAGCTATCAGAACAGTGGCATCTTTCACCGGTGAGAGAAAAGCAATAGAAAAGTATAATATCAAGTTAAAAATTGCTTATAAAACTATGGTTCAACAAGGGATGACCTCTGGTTTAGGAATGGGGTTACTTTTGTTGATTGTCTTCTGCACCTATGCACTTGCAATGTGGTATGGTTCTAAACTGGTTATTGAGAAAGAATTCCAGGGTGGAACCGTCATCACTGTAATAATAGCTCTTATGACTGGCGGAACGTCACTTGGTCAAACATCTCCTTGCCTAAACGCATTTGCCGCAGGACAAGCAGCAGCATATAAGATGTTTGAGACAATTAAAAGAAAGCCAGAAATTGATGCTTATGACACCAATGGTGTTGTCATGGAAGACATAAGGGGGGATATTGAACTAAAAGATGTTTACTTTAGCTACCCTGCAAGGAAAAATGTGCAGATCTTCTCTGGATTCTCATTATATGTTCCCAGTGGCACAACTGCTGCTTTAGTGGGTCAAAGTGGAAGTGGAAAGTCTACTGTGATAAGCTTATTGGAAAGATTCTATGATCCTGATGCTGGAGAGGTACTGATAGATGGCGTCAATTTGAAGAATTTTCAGGTTAGATGGATAAGAGAACAAATTGGGCTGGTTAGTCAAGAACCTATTCTGTTTGCAGCAAGTATCAAAGAGAACATTATGTATGGAAAAGAAGGTGCAACTGATGAGGAAATTAAGTCAGCAATAACACTTGCCAATGCCAATACGTTCATTGACAAGCTGCCTCAGGGCCTTGAGACAATGGCAGGCCAGAATGGGACTCAACTTTCTGGTGGGCAAAAGCAGAGAATTGCAATTGCAAGGGCAATTTTAAAGAACCCAAGAATCCTTCTTCTTGATGAAGCAACTAGTGCATTAGATGCCGAGTCCGAACGTGTTGTTCAAGAAGCATTAGAACAAGCCATGTCAAAAAGGACTACTGTAGTTGTTGCACATCGCTTGACAACAATCAGAAATGCTGACACCATAGCGGTGGTTCATCAAGGAAAAATTGTGGAGGAAGGAACTCATGATGAGTTAATCAAGGATGTTGATGGTGCTTATTCTCAGCTTATTCGCCTACAGGAAGGAGCTACGGAAGCTGAGGGTAGCCATAATTCTGAAGCAGAGAAGTCAAGTAACAATGTTATTTTTGATAGTCACATAGCTAGATCTTCCACTCAGAGAGAAGTTTCATTAAGCAGAGATTCATCTAGTAGACACTCACATGGATTTACTCTTTCTCATCGAAGTGGGGTACATGAATCTGTAGAAATAGAAGATGGGGATGTTGAAAAAAGTAAAGGTGATGCTAAGAAGGTTTCTTTGAGACGTTTGGCCTACTTAAACAAGCCTGAAGTTCCTATGTTAGTGCTTGGATCCGTTGCTGCAATAATAAATGGTCTTGTCTTCCCTATGTTTGGCTTCTTGTTTTCCTCAGCAATATCTATGTTCTTTGAACCTCCAGAAAAACAGCGGAAAGATTCTAGGTTCTGGGCACTTCTATATGTGGGTTTGGGTTTAATTACTCTTGTGGTCATACCTGTGCAAAATTACTTCTTCGGCGTTGCCGGAGGAAAATTAGTAGAAAGAATTCGTTCACTGACATTTGAAAAGGTTGTCCATCAAGAAATCAGTTGGTTTGATGATCCTGCAAATTCAAGTGGTGCAGTTGGGGCAAGGTTATCTAGTGATGCTTCAACAGTGAAAAGTCTAGTTGGTGATACACTGGCCCTCATTGTGCAAAACTTATCAACAATCATAGCTGGTCTAGTTATATCATTCACTGCTAATTGGATTCTTGCTTTCATTATTCTGGCTGTGTCACCCTTGGTCCTTATGCAAGGATTTCTTCAGATGAAGTTTCTTCAAGGATTCAGTGCGGATGCCAAGGTAAAGTACGAAGAGGCAAGTCAGGTGGCAAATGATGCTGTTGGTAGCATCAGAACTATCGCATCATTTTGTGCCGAATCGAAGGTGATGGATATGTACCGTAAGAAATGTTTAGAGCCAGAAAAACAAGGTGTTCGGTTGGGGCTTGTGAGTGGTGCAGGATTTGGTTTCTCTTTTTTGGCTCTGTACTGCACAAATGCTTTCTGTTTCTACATAGGATCTGTTCTTGTGGAACATGGGAAAGCAACTTTTCCAGAGGTTTTCAAGGTCTTCTTTTGTTTAACAATAACAGCAATCGGCATTTCCCAGTCTAGTGCCTTGGCACAAGACACCAACAAAGCCAAAGATTCCGCAGCTTCAATATTTAACATTCTTGACAGTACACCCACCATTGACTCCAGCAGCAATGAGGGTAGAACACTAGAAGCCATTTCTGGTGATATTGATTTTCAACATGTCAGTTTTAGTTACCCAACTAGGCCTCATATTCAAATTTTCAAAGATTTGTGTCTAAACATTCCAGCTGGAAAGACTGTTGCCTTGGTTGGAGGAAGTGGCAGTGGAAAATCAACAGTGATCAGCCTCTTAGAGAGATTTTACAACCCTCACACTGGACGTATACTACTGAATGGAATGGATATAAAAGAGTTCAGACTAAGCTGGTTGAGACAGCAAATGGGTTTGGTTGGTCAAGAACCTATTCTCTTCAATGAAAGCATTCGTGCCAACATAGCTTATGGCAAAGAAGGAATTGCCACAGAGGAAGAGATAACTGCAGCAGCCAAAGCATCCAATGCACACCAATTCATATGTGCTCTTCCCGAAGGCTATGACACCCATGTTGGAGAAAGAGGCACACAATTGTCAGGAGGACAAAAGCAGCGCATAGCCATTGCAAGAGCCATGCTGAAAGATCCCAAAATCCTCTTGCTTGATGAGGCAACTAGTGCACTTGATGCAGAATCAGAGAAAGTAGTTCAAGAGGCTCTAGATAGAGTGAGTGTGAGTAGAACTACAGTAGTAGTAGCTCACCGTCTTACAACAATTCGAGGGGCTGATATAATAGCCGTAATGAAAGATGGAGCGGTAGCTGAGAAGGGAACACATAATGAGTTGATGAAGATTATTGATGGAGTCTATGCATCATTGGTCGCTCTACATACGACTGCATCGTAA | 3792 | 0.4198 | MAHNTDMPPSSTSPQHHERDNDNQKVPFYKLFTFADHLDVAFMAIGTISAMANGWSQPIMSVIVGKLINTFGSTDPSNTIKEVSKVSLLFVYLAIASGVASFLQVTCWMVTGERQAARIRGLYLKTILKQDIAFFDTETTTGEVIGRMSGDTILIQDSMGEKVGKFIQLASTFIGGFVIAFVRGWRLTVVLVACIPCIVVTRGILSVLMSRMSSRGQAAYAEAGTVVEQTVGAIRTVASFTGERKAIEKYNIKLKIAYKTMVQQGMTSGLGMGLLLLIVFCTYALAMWYGSKLVIEKEFQGGTVITVIIALMTGGTSLGQTSPCLNAFAAGQAAAYKMFETIKRKPEIDAYDTNGVVMEDIRGDIELKDVYFSYPARKNVQIFSGFSLYVPSGTTAALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNFQVRWIREQIGLVSQEPILFAASIKENIMYGKEGATDEEIKSAITLANANTFIDKLPQGLETMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALEQAMSKRTTVVVAHRLTTIRNADTIAVVHQGKIVEEGTHDELIKDVDGAYSQLIRLQEGATEAEGSHNSEAEKSSNNVIFDSHIARSSTQREVSLSRDSSSRHSHGFTLSHRSGVHESVEIEDGDVEKSKGDAKKVSLRRLAYLNKPEVPMLVLGSVAAIINGLVFPMFGFLFSSAISMFFEPPEKQRKDSRFWALLYVGLGLITLVVIPVQNYFFGVAGGKLVERIRSLTFEKVVHQEISWFDDPANSSGAVGARLSSDASTVKSLVGDTLALIVQNLSTIIAGLVISFTANWILAFIILAVSPLVLMQGFLQMKFLQGFSADAKVKYEEASQVANDAVGSIRTIASFCAESKVMDMYRKKCLEPEKQGVRLGLVSGAGFGFSFLALYCTNAFCFYIGSVLVEHGKATFPEVFKVFFCLTITAIGISQSSALAQDTNKAKDSAASIFNILDSTPTIDSSSNEGRTLEAISGDIDFQHVSFSYPTRPHIQIFKDLCLNIPAGKTVALVGGSGSGKSTVISLLERFYNPHTGRILLNGMDIKEFRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGIATEEEITAAAKASNAHQFICALPEGYDTHVGERGTQLSGGQKQRIAIARAMLKDPKILLLDEATSALDAESEKVVQEALDRVSVSRTTVVVAHRLTTIRGADIIAVMKDGAVAEKGTHNELMKIIDGVYASLVALHTTAS | 1263 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun6g02551 | 1263 | FunFam | ABC transporter B family member 1 | 678 | 986 | - | - | |
Viun6g02551 | 1263 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1020 | 1257 | IPR003439 | GO:0005524 | |
Viun6g02551 | 1263 | FunFam | ABC transporter B family member 1 | 1010 | 1260 | - | - | |
Viun6g02551 | 1263 | FunFam | ABC transporter B family member 9 | 30 | 361 | - | - | |
Viun6g02551 | 1263 | Pfam | ABC transporter | 385 | 532 | IPR003439 | GO:0005524 | |
Viun6g02551 | 1263 | Pfam | ABC transporter | 1039 | 1188 | IPR003439 | GO:0005524 | |
Viun6g02551 | 1263 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 354 | 603 | IPR027417 | - | |
Viun6g02551 | 1263 | CDD | ABC_MTABC3_MDL1_MDL2 | 1020 | 1256 | - | - | |
Viun6g02551 | 1263 | SUPERFAMILY | ABC transporter transmembrane region | 30 | 349 | IPR036640 | GO:0005524|GO:0016020 | |
Viun6g02551 | 1263 | SUPERFAMILY | ABC transporter transmembrane region | 680 | 1004 | IPR036640 | GO:0005524|GO:0016020 | |
Viun6g02551 | 1263 | FunFam | ABC transporter B family member 1 | 355 | 604 | - | - | |
Viun6g02551 | 1263 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 688 | 1003 | - | - | |
Viun6g02551 | 1263 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 699 | 985 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Viun6g02551 | 1263 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 43 | 326 | - | - | |
Viun6g02551 | 1263 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 365 | 601 | IPR003439 | GO:0005524 | |
Viun6g02551 | 1263 | CDD | ABC_MTABC3_MDL1_MDL2 | 365 | 603 | - | - | |
Viun6g02551 | 1263 | ProSitePatterns | ABC transporters family signature. | 504 | 518 | IPR017871 | GO:0005524|GO:0016887 | |
Viun6g02551 | 1263 | Gene3D | - | 363 | 640 | IPR027417 | - | |
Viun6g02551 | 1263 | SMART | AAA_5 | 392 | 578 | IPR003593 | GO:0016887 | |
Viun6g02551 | 1263 | SMART | AAA_5 | 1047 | 1234 | IPR003593 | GO:0016887 | |
Viun6g02551 | 1263 | PANTHER | ABC TRANSPORTER B FAMILY | 10 | 610 | IPR039421 | - | |
Viun6g02551 | 1263 | Gene3D | - | 1010 | 1260 | IPR027417 | - | |
Viun6g02551 | 1263 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 44 | 330 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Viun6g02551 | 1263 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Viun6g02551 | 1263 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1010 | 1257 | IPR027417 | - | |
Viun6g02551 | 1263 | ProSitePatterns | ABC transporters family signature. | 1160 | 1174 | IPR017871 | GO:0005524|GO:0016887 | |
Viun6g02551 | 1263 | Gene3D | ABC transporter type 1, transmembrane domain | 987 | 1009 | IPR036640 | GO:0005524|GO:0016020 | |
Viun6g02551 | 1263 | Pfam | ABC transporter transmembrane region | 699 | 970 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Viun6g02551 | 1263 | Pfam | ABC transporter transmembrane region | 43 | 314 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Viun6g02551 | 1263 | Gene3D | ABC transporter type 1, transmembrane domain | 92 | 986 | IPR036640 | GO:0005524|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun6g02551 | Viun-Chr6 | 30157193 | 30162757 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun6g02551 | 8 | 1259 | Calmodulin-binding Proteins | AT2G36910 | 43.854 | 0.0 | 1050 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun6g02551 | K05658 | - | gmx:100801771 | 2070.43 |