Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02547 ATGGCTAACTTTAGTGCAAGTTACACTACTTCTGGTTTCATTTGTTACGGCCTTATACTTCCCCTTCTTCTATTATCGCTCTTCTTCTTTCAAATTGCATGGTCTGGCTCCACGGTTAAGTTCCTTCCTGGATTCGAAGGACCACTTCCTTTTGTCCTTGAAACCGGATATGTGGGAGTGGGTGAATCAGAGGATGTTCAGGCATTCTACTACTTCATTGAGTCGGAGAACAATCCAAAGGAGGATCCTCTCATTCTTTGGCTCCCTGGTGGTCCTGGTTGCTCAGGCTTCTCTGCCCTTGTCTTAGAGATAGGTCCTCTTGGTTTTAAGCACGAGGAATACGATGGAACCATCCCCAATTTGTTCTACAGGAAACATTCGTGGACTAAGGTTAGTAGCATAATATTTGTAGACTTGCCAGTTTTCTCTGGATTCACTTATTCCACAACAGAGTCTACTGCTCAAAGAAGTGACTGGATAATTGTTCACCTGGCCCATCAATTTCTAAGGAAGTGGCTGATTGATCATCCAACTTTTTTGTCAAACGAAGTTTACATCGGTGGCGATTCGTACTCTGGCTTTCTTGTTCCAGTGATTGTTCAAGAAATTTCACAAGCAAATGAAAAAGGGGTTCAACCATGGATAAATCTCCAGGGATACCTGTTAGGGAATGCTGCTACTACTGCAAGAGAAAATAATTATCAAATTCCTTTTTCTCATGGAATGGGACTTATTTCCGATGAATTATATGAGTCACTACAAAAAAATTGCAGAGGAGAGTACATAAAAGTAGACGTCAAAAATGTATTATGCTCTAGAGATATCGAGTCATTCAACGAGGCTTTATCAGGAGTTAGTACTGTCAATATTTTGGACCCATTATGTGAGTGGATGGATACCGAAACATCTTGGAGGAGATCACTAATTAAGAAATATTCCAGCACGAATTTCCTAAACACTCGTCTCAAATTGCCATCCTTAAACTGTCGAAGTTATGTATACTTCCTCTGCGGTTTTTGGGCCAATGATGATAATGTTCGCACTGCATTACATGTTCGTCAGGGAAGTATAGGAAAATGGCGTCGTTGTACGTACGATATACCTTACAAGAAAGATATCCCAAGCAGTTTTGAGTATCACGTAAATCTGAGTCGAATGGGCTATCGTTCGCTCATATACAGTGGCGATCATGACTTTTTGGTTCCTTTCTTGGCAACTCAAGCATGGGTCAAATCTTTAAACTACTCCATTGTAGATGATTGGAGGCAATGGCGTACAAATGGTCAAGTTGCAGGATACACCAGGACTTACTCCAATGGAATGACATTTGCAACTGTGAAGGGTGGAGGTCACACAGCTCCAGAATACAAACCTGAAGAATGTCTTGACATGTTCAGTAGATGGCTATCTAAGAGGCCTTTGTAG 1425 0.4133 MANFSASYTTSGFICYGLILPLLLLSLFFFQIAWSGSTVKFLPGFEGPLPFVLETGYVGVGESEDVQAFYYFIESENNPKEDPLILWLPGGPGCSGFSALVLEIGPLGFKHEEYDGTIPNLFYRKHSWTKVSSIIFVDLPVFSGFTYSTTESTAQRSDWIIVHLAHQFLRKWLIDHPTFLSNEVYIGGDSYSGFLVPVIVQEISQANEKGVQPWINLQGYLLGNAATTARENNYQIPFSHGMGLISDELYESLQKNCRGEYIKVDVKNVLCSRDIESFNEALSGVSTVNILDPLCEWMDTETSWRRSLIKKYSSTNFLNTRLKLPSLNCRSYVYFLCGFWANDDNVRTALHVRQGSIGKWRRCTYDIPYKKDIPSSFEYHVNLSRMGYRSLIYSGDHDFLVPFLATQAWVKSLNYSIVDDWRQWRTNGQVAGYTRTYSNGMTFATVKGGGHTAPEYKPEECLDMFSRWLSKRPL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02547 474 FunFam Carboxypeptidase 377 471 - -
Viun6g02547 474 SUPERFAMILY alpha/beta-Hydrolases 39 473 IPR029058 -
Viun6g02547 474 FunFam Carboxypeptidase 328 473 - -
Viun6g02547 474 FunFam Serine carboxypeptidase-like 11 33 474 - -
Viun6g02547 474 Gene3D alpha/beta hydrolase 48 473 IPR029058 -
Viun6g02547 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 458 IPR001563 GO:0004185|GO:0006508
Viun6g02547 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Viun6g02547 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Viun6g02547 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Viun6g02547 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Viun6g02547 474 Pfam Serine carboxypeptidase 43 470 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02547 Viun-Chr6 30113312 30117370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02547 33 62 Calmodulin-binding Proteins AT2G22960 76.667 1.78e-08 52.4