Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02540 ATGCCTAAGCAAATTCATGAGATTAAGGACTTTCTTCTCACCGCCAGAAGAAAGGATGCGAGGTCGGTGAAGATTAAGAGGAGCAGAGATGTGGTTAAGTTCAAGGTTAGATGCTCCAAGTACCTCTACACACTCTGTGTGTTTGATCCAGAGAAAGCTGATAAATTGAAGCAATCACTTCCTCCAGGTTTGAGTGTTCAAGACCTGTAA 210 0.4286 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02540 69 Gene3D - 1 69 IPR038464 -
Viun6g02540 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Viun6g02540 69 FunFam 60S ribosomal protein L38 1 69 - -
Viun6g02540 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02540 Viun-Chr6 30094845 30096175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02540 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 1.07e-43 133