Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02506 ATGAGGAGAAACTGCAACTTGGAACTTGCCCTTTTCCCTCCCTCCGATTCTGGCCCTCTCCACCACCACCCCGCCAGGGTTCAAGAAACTACTGAGATCAGTCCGCTCCATCACCACCACCGACAGGAGCACCAACAACAACCGCTCACAATTTTCTACGATGGCAAGATTTGTGTTGCCGATGTCACCGAGCTTCAGGCGAAGTCTATTTTAATGCTTGCAAATGGAAAATTGGAAGAAAGAGCTCGAACAGGAAATGGATCAGAAGCATCTTCTCCCACAGTTTTGCAATCTCCTAATCAGTTGTATAGTCCTGGCACTGGACTTTCCATGAGAAAATCCTTGCAACGCTTCCTTATCAAGAGAAAGAATCGGGTCCAAGAAGCCTCACCATACCATCACTAG 405 0.479 MRRNCNLELALFPPSDSGPLHHHPARVQETTEISPLHHHHRQEHQQQPLTIFYDGKICVADVTELQAKSILMLANGKLEERARTGNGSEASSPTVLQSPNQLYSPGTGLSMRKSLQRFLIKRKNRVQEASPYHH 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02506 134 Pfam tify domain 45 75 IPR010399 -
Viun6g02506 134 Pfam Jas motif 112 132 IPR018467 -
Viun6g02506 134 ProSiteProfiles Tify domain profile. 42 76 IPR010399 -
Viun6g02506 134 MobiDBLite consensus disorder prediction 85 108 - -
Viun6g02506 134 SMART tify_2 42 76 IPR010399 -
Viun6g02506 134 MobiDBLite consensus disorder prediction 81 108 - -
Viun6g02506 134 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 21 132 IPR040390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02506 1 133 Tify Gene Family AT1G30135 39.552 2.23e-23 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Viun6g02506 tify 7.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02506 - - gmx:100500349 210.69