Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02447 ATGGAGTGCAATAAAGAAGAGGCCGTAAGGGCCAAGGAAATTGCTGAAGAGAGAATGCAAAACAAAGATTTCAATGGGGCTCGAAAATTTGTTCTTAAGGCACAGCAGCTATATCCTGATTTGGAGAATATTAATCAAATGCTTATTGTCTGTGATGTGCATTGCTTTGCTGAGCAGAAATTGTTAGGCAATGAGATGGACTGGTATAAAATTCTTCAAATTGATCTGACGGCTAATGATACAACAATTAAGAAGCAATACAGAAAGTTTGCCCTCCAACTTCATCCTGACAAAAACAAGTTTTCTGGTGCAGAAGCTGCTTTTAAGCTCATTGGGGAAGCTCAAAGAGTTCTTTTAGATAGAGAAAAACGATCTAGGCTTGACATGAATCTGCACAGGGCTCCAATGAACAGAGCTACCATGCCATCTCATCATCAGCAGAATGTTCAGATGAATTTTAATCCTGTGATGCAAACCACTGTTAGACCCATTTTTACAAACTTAAATCCTCATCAGCAACAACAGTCTAGGCAGACATCTCATCAGGGGCCCAATGGTGGCCGCCGTACTTTTTGGACCATGTGCTCATTTTGTTTTGTTAGATATGAGTATTTTCTGGAAGTTTTAAACAGATCTCTTCGCTGTCAACATTGCAATAGGCCCTTCATTGCAAATGATGTTCGTATGCAAAATACAGTACCAGCAACTAATTCAACTCAGCAAGCTTTTGGTGTGCAGAACCATAGTCAGAATCATGGTGCTTTCAATGTTGGTGTTGGATCTCGAGGTAATGTGCATACTCACAGATCAAATACTGAATCACACAAAAAAAAACGCCATACTGTGGATGACCCTATAAAGCCAAATGGAAAGAGAAGGAGAAAGCGGGCAGCTGAATCCAGTGAAAGTTCTGAATCTGTGGGCAGTACTGATTCTGAATCTGAAGAAGAGGTTCGCTTTGACAATGATGCTGTTCCTGGTTTTTCTACCCACAGAGAAGAGAATCCACGTAGATCTACGCGGCAAAAGCATCAGGTTTCCTACAAGGAAAATGTGAGTGATGATGAAGGGAGTGGATCTCCATCTGTTGCTGATGAAGAGGAGCATGAAGAGGCAGCTATAATTAATGAACAAAATGGTTTGGCTGCTGATAAGAAAGATCAGCAACAGGTTAAGGGGAAGCAGAACTTTTATTCTGAAGAGGGCGTTCAAAATATAAAAGAGGAGCTTAAGGAGGTGAGGGAAAAAGAGGCAGTGGGTAGCTCGAACACAGACAAAACTTCAGAGCATTCACCCTTGAAATCAGCAGATCAACCAGTTGAGTTTATTTATCCAGATGCAGAATTCAGTGACTTTGACAAAGACAAGAAAGAGGGGTCTTTTGCTGCTGGGCAGATTTGGGCTATTTACGATACTGTAGATGGTATGCCTCGATTCTATGCTTTAATCAGAAAAGTTCTCTCTCCTGGATTCAAGTTGCGAATAACATGGTTTGAACCAGATGCGGAAGAGAAAGATGAAATCCACTGGATAAATGAGCAATTGCCAGTTGCTTGTGGGAAACATAGACTTGGTAATACAGAAAGTACCGAAGATCCATTGATGTTCTCTCATCTTATTGTTTGTGAAAAGATTGGCCGCAGTAGGTATAACGTATATCCTAGAAAGGGAGAAACGTGGGCTCTTTTCAAAAATTGGGATATCAAATGGCATATGGATGCAGAGTCTCATAAGCAGTATGATTTTGAATTTGTCGAAATCTTATCAGATTACATTGAAGGTGTGGGAGTAGTTGTTGCGTACTTGGGTAAATTGAAAGGTTTTACATCTCTATTCTCTCAACTGGATGGAGGCAAGCGTACCATTCAAATTCCATCAACCGAGTTATTCAGATTCTCTCACAGGATTCCATCTTTTAAAATGACTGGTCAGGAAAGAGTTGGTGTTCCTGTAGGGTCTTGGGAACTTGATCCTGTATCCCTGCCAAGGAATATTGAGGAAATTGATGTTTCTGGAAATTTGGATGTAAATATCGGGCATTGGCCATCTAGTGGGAATGGCACAAGGTCTTCGGATATGTCGAAATTTTCCAGGGAGGTAGATGCATCTACTACAAAGCTTAATTTGGAAAGAAACAAATCTTCAAAGGAAAGCAAGGATCCCATTGAACATACTGGTAGTGATTCTTCATTCTCAGCCACAGATGCTTTTGAAATTCCAGATCCTGAGTTCTATAATTTTGATGCTGGGAGGTCCATAGAAAAGTTTCAGGTTGGTCAGATTTGGGCATTTTATGGGGATGAGGATGGACTACCAAAATACTATGGTCAGATTAAGAAGATTAGGATCAGACCAGAATTTGAGTTGCAAGTTACTTATCTTACTAACTGCTGGATACCAGAGAACTGTGTCAGATGGGAAGATAAAGACATGCTTATTTCCATTGGCAGATTTAAAATCAAAGGCGCCGGTCCCTACACTTATACTAACACCCGTTCTATTTCACATCAGGTGCAGACTATTGCTGACAGTAAGAAGGAATATGAAATTTTTCCAAGGAAAGGCGAAATTTGGGCACTGTACAAGAATTGGACGACTAAAATAAAACGTTCTGATCTGGAAAATTTGAAGTATGACATAGTGGAAGTTGTTGGAGAAAATGATTTGTGGATGGATGTTGTACCTTTGGAGTTGGTAAGTGGTTATAAGTCAGTTTTTAAGGGCAACTCAAATGCACGATCAGCTAGGACCATGAAAATATTTTGGAAAGAGTTGCTCAGGTTCTCCCACCAAATCCCTGCCTTTAAACTATCAGAAGAACATGGTGGCAATCTGAGAGGCTTCTGGGAGCTTGATCCTGGAGCACTACCCCCTCATTATTTTAATAGCAAATGA 2895 0.4045 MECNKEEAVRAKEIAEERMQNKDFNGARKFVLKAQQLYPDLENINQMLIVCDVHCFAEQKLLGNEMDWYKILQIDLTANDTTIKKQYRKFALQLHPDKNKFSGAEAAFKLIGEAQRVLLDREKRSRLDMNLHRAPMNRATMPSHHQQNVQMNFNPVMQTTVRPIFTNLNPHQQQQSRQTSHQGPNGGRRTFWTMCSFCFVRYEYFLEVLNRSLRCQHCNRPFIANDVRMQNTVPATNSTQQAFGVQNHSQNHGAFNVGVGSRGNVHTHRSNTESHKKKRHTVDDPIKPNGKRRRKRAAESSESSESVGSTDSESEEEVRFDNDAVPGFSTHREENPRRSTRQKHQVSYKENVSDDEGSGSPSVADEEEHEEAAIINEQNGLAADKKDQQQVKGKQNFYSEEGVQNIKEELKEVREKEAVGSSNTDKTSEHSPLKSADQPVEFIYPDAEFSDFDKDKKEGSFAAGQIWAIYDTVDGMPRFYALIRKVLSPGFKLRITWFEPDAEEKDEIHWINEQLPVACGKHRLGNTESTEDPLMFSHLIVCEKIGRSRYNVYPRKGETWALFKNWDIKWHMDAESHKQYDFEFVEILSDYIEGVGVVVAYLGKLKGFTSLFSQLDGGKRTIQIPSTELFRFSHRIPSFKMTGQERVGVPVGSWELDPVSLPRNIEEIDVSGNLDVNIGHWPSSGNGTRSSDMSKFSREVDASTTKLNLERNKSSKESKDPIEHTGSDSSFSATDAFEIPDPEFYNFDAGRSIEKFQVGQIWAFYGDEDGLPKYYGQIKKIRIRPEFELQVTYLTNCWIPENCVRWEDKDMLISIGRFKIKGAGPYTYTNTRSISHQVQTIADSKKEYEIFPRKGEIWALYKNWTTKIKRSDLENLKYDIVEVVGENDLWMDVVPLELVSGYKSVFKGNSNARSARTMKIFWKELLRFSHQIPAFKLSEEHGGNLRGFWELDPGALPPHYFNSK 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02447 964 SUPERFAMILY Chaperone J-domain 64 153 IPR036869 -
Viun6g02447 964 Pfam Domain of unknown function (DUF3444) 736 940 IPR024593 -
Viun6g02447 964 Pfam Domain of unknown function (DUF3444) 441 645 IPR024593 -
Viun6g02447 964 MobiDBLite consensus disorder prediction 312 351 - -
Viun6g02447 964 MobiDBLite consensus disorder prediction 276 301 - -
Viun6g02447 964 MobiDBLite consensus disorder prediction 250 397 - -
Viun6g02447 964 SMART dnaj_3 66 123 IPR001623 -
Viun6g02447 964 Gene3D DnaJ domain 64 181 IPR036869 -
Viun6g02447 964 MobiDBLite consensus disorder prediction 704 724 - -
Viun6g02447 964 Pfam DnaJ domain 67 128 IPR001623 -
Viun6g02447 964 MobiDBLite consensus disorder prediction 679 703 - -
Viun6g02447 964 MobiDBLite consensus disorder prediction 679 735 - -
Viun6g02447 964 MobiDBLite consensus disorder prediction 250 267 - -
Viun6g02447 964 CDD DnaJ 67 120 IPR001623 -
Viun6g02447 964 PRINTS DnaJ domain signature 87 102 IPR001623 -
Viun6g02447 964 PRINTS DnaJ domain signature 103 123 IPR001623 -
Viun6g02447 964 PRINTS DnaJ domain signature 69 87 IPR001623 -
Viun6g02447 964 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Viun6g02447 964 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 688 - -
Viun6g02447 964 MobiDBLite consensus disorder prediction 413 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02447 Viun-Chr6 29466940 29472265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02447 4 244 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.603 2.75e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02447 - - gmx:100779228 1525.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02447 6 29466940 29472265 Viun6g02447 6 29466940 29472265 ECH
Viun3g05812 3 63243855 63248213 Viun6g02447 6 29466940 29472265 PCT