Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun6g02376 | ATGCATCCTGATCAGAGAAAAAAGTCGTCCGTGGATGTGGACTTCTTTACAGAATATGGTGAGGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAGCATGTTTCTGATGCTACTCGCATTCTTCGTGAGATTAAGCTTCTTAGACTTTTACGCCATCCAGATATTGTGGAGATCAAGCATATTCTCTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTCTTTGAACTCATGGAATCTGATCTGCATCAGGTCATCAAAGCTAATGATGATCTGACGCCAGAGCATTACCAGTTTTTCCTGTATCAGCTTCTTCGAGGCTTGAAGTATATACACACTGCAAATGTATTTCACCGTGATCTAAAGCCAAAGAACATTTTAGCAAATGCTGATTGCAAGCTGAAGATTTGTGACTTCGGACTTGCGAGAGTGGCTTTCAATGATACCCCTACTGCTATCTTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCTCCTGAGTTGTGCGGATCCTTTTTTTCCAAGTATACACCGGCTATAGACATATGGAGCATTGGCTGCATATTTTCAGAACTTTTGACTGGAAAACCTCTTTTCCCTGGGAAAAATGTTGTTCATCAACTAGACCTTATGACTGATCTTCTTGGAACTCCATCTCCTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTCGTAGATATTTGAGCAGCATGCGTAAGAAGAAGCCAGTTCCTTTCTCACAAAAGTTTCCAAATGCAGACCCCCTAGCTCTTCGGTTGTTAGAGAGAATGTTGGCATTTGAGCCTAAGGATCGGCCTACTGCTGAAGAGGCTCTAGCGGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCATCTGCTCAGCCTGTTACCAAGATGGAATTTGAGTTTGAGAGACGCCGGATAACAAAGGAAGATGTCCGTGAGCTTATATACCGTGAGATTCTGGAGTACCATCCGAAGATGTTGAAGGAATTTCTAGAGGGAGCAGAACCAACAGGCTTCATGTATCCGAGTGCTGTGGATCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTACGGCAAGGGAGGAACTGTTGCTCCACCTGAGAGGCAACATGCATCTTTGCCCAGGCCTTGTGTGTTGTATTCAGACAACAAAATACATAATACGTCGGACGTTGCAGATGATTTGTCCAAATGTTCCATCAAAGAAGTTGAGAAACAACCAGTAGATAGGAGTAATGTTATCCCTATGTCCCGGCTTCCTTTACCAGCACCTCAAAATATTCAAGGTGTGGCAGCAAGGCCGGGAAAGGTTGTTGGTTCAGTGATGCGATACAATAACTGTGGGGTAGCAGTAACGGCTGAAACTGAGCAGAGGAGGATAGTCAGGAATCCATCTGTTTCAGCTCAGTTCGCAGCGTCGAACTGTTCATATCCTAGGAGAAACCCGGGCTATAAAAGTGAGAGGGATGCAGAGGATGATGGGATCGAAGGTTCAAATGGACTGCAGCCAAAGCCTCAATACATGGCAAGAAAAGTGGCTGCTGCACCAGGTGGACCTGGTGGTCAGTGGTATTGA | 1692 | 0.4397 | MHPDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFSELLTGKPLFPGKNVVHQLDLMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFSQKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDNKIHNTSDVADDLSKCSIKEVEKQPVDRSNVIPMSRLPLPAPQNIQGVAARPGKVVGSVMRYNNCGVAVTAETEQRRIVRNPSVSAQFAASNCSYPRRNPGYKSERDAEDDGIEGSNGLQPKPQYMARKVAAAPGGPGGQWY | 563 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun6g02376 | 563 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 320 | IPR011009 | - | |
Viun6g02376 | 563 | FunFam | Mitogen-activated protein kinase | 15 | 119 | - | - | |
Viun6g02376 | 563 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 24 | 340 | - | - | |
Viun6g02376 | 563 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 361 | - | - | |
Viun6g02376 | 563 | SMART | serkin_6 | 25 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun6g02376 | 563 | MobiDBLite | consensus disorder prediction | 512 | 545 | - | - | |
Viun6g02376 | 563 | CDD | STKc_TDY_MAPK | 24 | 361 | - | - | |
Viun6g02376 | 563 | ProSiteProfiles | Protein kinase domain profile. | 25 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun6g02376 | 563 | FunFam | Mitogen-activated protein kinase | 111 | 339 | - | - | |
Viun6g02376 | 563 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 339 | - | - | |
Viun6g02376 | 563 | ProSitePatterns | MAP kinase signature. | 60 | 163 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Viun6g02376 | 563 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 55 | IPR017441 | GO:0005524 | |
Viun6g02376 | 563 | Pfam | Protein kinase domain | 25 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun6g02376 | Viun-Chr6 | 29019095 | 29025471 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun6g02376 | 1 | 563 | MAP Kinase Gene Family | AT5G19010 | 80.139 | 0.0 | 934 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_MAPK | Viun6g02376 | Pkinase | 1.6e-67 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun6g02376 | - | - | gmx:100814013 | 1078.16 |