Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02375 ATGACAAAGCTTAGTTCAAGTTGCAGCACTGGTTATGTTTTGGCTCATTACAGGATTCCACTTCCCCTTCTTCTCTTATCACAATTCTTCTTTCAACTTTCATGGTGTGGCTCCACAGTTAAGTTCCTTCCTGGATTCGAGGGACCTCTTCCTTTTGTTCTTGAAACCGGATATGTGGGAGTGGGTGAATCAGAGGATGTGCAGGCATTCTACTACTTCATTGAGTCAGAGAACAATCCAAAGGACGATCCTCTCATGCTTTGGCTCACTGGTGGCCCTGGTTGTTCAGCCCTCTCTGGTCTTGTCTCTGAAATAGGTCCACTTGGTTTTAAACATGAAGAGTATAATGGAAGCCTCCCAAATTTGTTCTTGAGGCCACACTCATGGACAAAGGTTAGTAGCATTATATTCGTAGACTTGCCTGTTTCTACAGGCTTCACTTATGCCACCACAAAGTCGGCTACTCAACGAAGTGATTCCACACTAGTTCTCCAAGTCCATCAATTTCTTAGGAAGTGGTTGGTTGATCATCCAAATTTTTTGACAAATGAAGTTTACATTGGTGGCGATTCATATTCTGGAATTCCTGTTCCGGCAGTGGTTCAAGAAATTTTCCGAGGAAATCAGAAAGGCGTTCAACCATGGATAAATCTCCAGGGTTACCTGCTAGGGAATGCACTAACAACTCGAAGAGAAGAGAACTATCAAATTCCCTTTTCTCACGGAATGGCACTTATATCTGATGAACTATACGAGTCACTGCAAAAACATTGTAAAGGAGAGTACATAAATGTAGACACCAGAAATGCATTATGTTCCAGAGATATGGCGTCATTTGACGCGGCTATATCAGGAATTTCAGACACGTATATTTTGGAGCCAAAGTGCGAATGGCTTGATACGGACACATCTCAGAGGATATCACTAATTAAGAAATATCCCGCCAACAAGCTCTCAGATACTCATCTCAATTTGCCACCCTTAAGCTGTGGAACTTATGTATACTTCCTCTGCGGTTTTTGGGCCAATGATGACAATGTTCGCAGTGCACTGCATATCCGCAAGGGAAGTATAGGAAAATGGCGTCGGTGTACCTTGGATATACCTCACGATATGGATATTCCAGAAAGCTATGGGTATCATGTAAACCTTAGTAGAAAAGGTTATCGTTCACTGATATACAGTGGCGACCATGACATGAAAATAGCTTTCTTGGCAACTCAGGCATGGATAAGATCTTTGAACTACTCCATCGTAGATGATTGGAGGCAATGGTATACAGATGGCCAAGTTGCAGGATACACAAGAACTTACTCCAATCGTATGACATTTGCAACTGTGAAGGGTGGAAGCCACATAGCTCCAGAGTCCAATCCTAAAGAATGCTTTGCTATGTTCAGTAGATGGTTATCTAAGAGGCCTTTGTAG 1428 0.4251 MTKLSSSCSTGYVLAHYRIPLPLLLLSQFFFQLSWCGSTVKFLPGFEGPLPFVLETGYVGVGESEDVQAFYYFIESENNPKDDPLMLWLTGGPGCSALSGLVSEIGPLGFKHEEYNGSLPNLFLRPHSWTKVSSIIFVDLPVSTGFTYATTKSATQRSDSTLVLQVHQFLRKWLVDHPNFLTNEVYIGGDSYSGIPVPAVVQEIFRGNQKGVQPWINLQGYLLGNALTTRREENYQIPFSHGMALISDELYESLQKHCKGEYINVDTRNALCSRDMASFDAAISGISDTYILEPKCEWLDTDTSQRISLIKKYPANKLSDTHLNLPPLSCGTYVYFLCGFWANDDNVRSALHIRKGSIGKWRRCTLDIPHDMDIPESYGYHVNLSRKGYRSLIYSGDHDMKIAFLATQAWIRSLNYSIVDDWRQWYTDGQVAGYTRTYSNRMTFATVKGGSHIAPESNPKECFAMFSRWLSKRPL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02375 475 SUPERFAMILY alpha/beta-Hydrolases 40 474 IPR029058 -
Viun6g02375 475 Gene3D alpha/beta hydrolase 37 307 IPR029058 -
Viun6g02375 475 Gene3D - 337 475 - -
Viun6g02375 475 Pfam Serine carboxypeptidase 44 471 IPR001563 GO:0004185|GO:0006508
Viun6g02375 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Viun6g02375 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Viun6g02375 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Viun6g02375 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Viun6g02375 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 459 IPR001563 GO:0004185|GO:0006508
Viun6g02375 475 FunFam Serine carboxypeptidase-like 11 34 475 - -
Viun6g02375 475 FunFam Carboxypeptidase 329 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02375 Viun-Chr6 29004007 29010077 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02375 36 63 Calmodulin-binding Proteins AT2G22960 75.000 4.85e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02375 K16296 - gmx:100792006 778.859