Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02373 ATGACAAAGCTTAGTTCAAGTTGCAGCACTGGTTATGTTTTGGCTCATTACAGGATTCCACTTCCCCTTCTTCTCTTATCACAATTCTTCTTTCAACTTTCATGGTGTGGCTCCACAGTTAAGTTCCTTCCTGGATTCGAGGGACCTCTTCCTTTTGTTCTTGAAACCGGATATGTGGGAGTGGGTGAATCAGAGGATGTGCAGGCATTCTACTACTTCATTGAGTCAGAGAACAATCCAAAGGACGATCCTCTCATGCTTTGGCTCACTGGTGGCCCTGGTTGTTCAGCCCTCTCTGGTCTTGTCTCTGAAATAGGTCCACTTGGTTTTAAACATGAAGAGTATAATGGAAGCCTCCCAAATTTGTTCTTGAGGCCACACTCATGGACAAAGGTTAGTAGCATTATATTCGTAGACTTGCCTGTTTCTACAGGCTTCACTTATGCCACCACAAAGTCGGCTACTCAACGAAGTGATTCCACACTAGTTCTCCAAGTCCATCAATTTCTTAGGAAGTGGTTGGTTGATCATCCAAATTTTTTGACAAATGAAGTTTACATTGGTGGCGATTCATATTCTGGAATTCCTGTTCCGGCAGTGGTTCAAGAAATTTTCCGAGGAAATCAGAAAGGCGTTCAACCATGGATAAATCTCCAGGGTTACCTGCTAGGGAATGCACTAACAACTCGAAGAGAAGAGAACTATCAAATTCCCTTTTCTCACGGAATGGCACTTATATCTGATGAACTATACGAGGCTATATCAGGAATTTCAGACACGTATATTTTGGAGCCAAAGTGCGAATGGCTTGATACGGACACATCTCAGAGGATATCACTAATTAAGAAATATCCCGCCAACAAGCTCTCAGATACTCATCTCAATTTGCCACCCTTAAGCTGTGGAACTTATGTATACTTCCTCTGCGGTTTTTGGGCCAATGATGACAATGTTCGCAGTGCACTGCATATCCGCAAGGGAAGTATAGGAAAATGGCGTCGGTGTACCTTGGATATACCTCACGATATGGATATTCCAGAAAGCTATGGGTATCATGTAAACCTTAGTAGAAAAGGTTATCGTTCACTGATATACAGTGGCGACCATGACATGAAAATAGCTTTCTTGGCAACTCAGGCATGGATAAGATCTTTGAACTACTCCATCGTAGATGATTGGAGGCAATGGTATACAGATGGCCAAGTTGCAGGATACACAAGAACTTACTCCAATCGTATGACATTTGCAACTGTGAAGGGTGGAAGCCACATAGCTCCAGAGTCCAATCCTAAAGAATGCTTTGCTATGTTCAGTAGATGGTTATCTAAGAGGCCTTTGTAG 1341 0.4273 MTKLSSSCSTGYVLAHYRIPLPLLLLSQFFFQLSWCGSTVKFLPGFEGPLPFVLETGYVGVGESEDVQAFYYFIESENNPKDDPLMLWLTGGPGCSALSGLVSEIGPLGFKHEEYNGSLPNLFLRPHSWTKVSSIIFVDLPVSTGFTYATTKSATQRSDSTLVLQVHQFLRKWLVDHPNFLTNEVYIGGDSYSGIPVPAVVQEIFRGNQKGVQPWINLQGYLLGNALTTRREENYQIPFSHGMALISDELYEAISGISDTYILEPKCEWLDTDTSQRISLIKKYPANKLSDTHLNLPPLSCGTYVYFLCGFWANDDNVRSALHIRKGSIGKWRRCTLDIPHDMDIPESYGYHVNLSRKGYRSLIYSGDHDMKIAFLATQAWIRSLNYSIVDDWRQWYTDGQVAGYTRTYSNRMTFATVKGGSHIAPESNPKECFAMFSRWLSKRPL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02373 446 FunFam Serine carboxypeptidase-like 19 35 266 - -
Viun6g02373 446 SUPERFAMILY alpha/beta-Hydrolases 40 445 IPR029058 -
Viun6g02373 446 Gene3D alpha/beta hydrolase 49 445 IPR029058 -
Viun6g02373 446 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 430 IPR001563 GO:0004185|GO:0006508
Viun6g02373 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Viun6g02373 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Viun6g02373 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 413 426 IPR001563 GO:0004185|GO:0006508
Viun6g02373 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Viun6g02373 446 FunFam Carboxypeptidase 300 445 - -
Viun6g02373 446 Pfam Serine carboxypeptidase 44 442 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02373 Viun-Chr6 29004005 29010077 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02373 36 63 Calmodulin-binding Proteins AT2G22960 75.000 5.40e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02373 K16296 - gmx:100792006 721.079