Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02367 ATGTCAGAGTATGAGTATGGGTCACTGAAAATGGCAAAGCTTAGTTCAAGTTGCAGCACTGGTTATGTTTTGGCTCATTACAGGATTCCACTTCCCCTTCTTCTCTTATCACAATTCTTCTTTCAACTTTCATGGTGTGGCTCCACAGTTAAGTTCCTTCCTGGATTCGAGGGACCTCTTCCTTTTGTTCTTGAAACCGGATATGTGGGAGTGGGTGAATCAGAGGATGTGCAGGCATTCTACTACTTCATTGAGTCAGAGAACAGTCCAAAGGACGATCCTCTCATGCTTTGGCTCACTGGTGGCCCTGGTTGTTCAGCCCTCTCTGGTCTTGTCTTTGAAATAGGTCCACTTGGTTTTAAACATGAAGAGTATAATGGAAGCCTCCCAAATTTGTTCTTGAGGCCACACTCATGGACAAAGGTTAGTAGCATTATATTTGTAGACTTGCCTGTTTCTACAGGCTTCACTTATGCCACCACAAAATCGGCTACTCAACGAAGTGATTCCACACTAGTTCTCCAAGTCCATCAATTTCTTAGGAAGTGGTTGATTGATCATCCAAATTTTTTGACAAATGAAGTTTACATTGGTGGCGATTCATATTCTGGAATTCCTGTTCCAGCAGTGGTTCAAGAAATTTCCCGAGGAAATCAGAAAGGCGTTCAACCATGGATAAATCTCCAGGGTTACCTGCTAGGGAATGCACTAACAACTCGAAGAGAAGAGAACTATCAAATTCCCTTTTCTCACGGAATGGCACTTATATCTGATGAACTATACGAGTCACTGCAAAAACATTGTAAAGAAGAGTACATAAATGTAGACACCAGAAATGCATTATGTTCCAGAGATATGGCGTCATTTGACGCGGCTATATCAGGAATTTCAGACACGTATATTTTGGAGCCAAAGTGCGAATGGCTTGATACGGACACATCTCAGAGGATATCACTAATTAAGAAATATCCCGCCAACAAGCTCTCAGATACTCATCTCAATTTGCCACCCTTAAGCTGTGGAACTTATGTATACTTCCTCTGCGGTTTTTGGGCCAATGATGACAATGTTCGCAGTGCACTGCATATCCGCAAGGGAAGTATAGGAAAATGGCGTCGGTGTACCTTGGATATACCTCACGATATGGATATTCCAGAAAGCTATGGGTATCATGTAAACCTTAGTAGAAAAGGTTATCGTTCACTGATATACAGTGGCGACCATGACATGAAAATAGCTTTCTTGGCAACTCAGGCATGGATAAGATCTTTGAACTACTCCATCGTAGATGATTGGAGGCAATGGTATACAGATGGCCAAGTTGCAGGATACACAAGAACTTACTCCAATCGTATGACATTTGCAACTGTGAAGGGTGGAAGCCACATAGCTCCAGAGTCCAATCCTAAAGAATGCTTTGCTATGTTCAGTAGATGGTTATCTAAGAGGCCTTTGTAG 1458 0.4225 MSEYEYGSLKMAKLSSSCSTGYVLAHYRIPLPLLLLSQFFFQLSWCGSTVKFLPGFEGPLPFVLETGYVGVGESEDVQAFYYFIESENSPKDDPLMLWLTGGPGCSALSGLVFEIGPLGFKHEEYNGSLPNLFLRPHSWTKVSSIIFVDLPVSTGFTYATTKSATQRSDSTLVLQVHQFLRKWLIDHPNFLTNEVYIGGDSYSGIPVPAVVQEISRGNQKGVQPWINLQGYLLGNALTTRREENYQIPFSHGMALISDELYESLQKHCKEEYINVDTRNALCSRDMASFDAAISGISDTYILEPKCEWLDTDTSQRISLIKKYPANKLSDTHLNLPPLSCGTYVYFLCGFWANDDNVRSALHIRKGSIGKWRRCTLDIPHDMDIPESYGYHVNLSRKGYRSLIYSGDHDMKIAFLATQAWIRSLNYSIVDDWRQWYTDGQVAGYTRTYSNRMTFATVKGGSHIAPESNPKECFAMFSRWLSKRPL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02367 485 FunFam Carboxypeptidase 339 484 - -
Viun6g02367 485 Gene3D alpha/beta hydrolase 59 484 IPR029058 -
Viun6g02367 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Viun6g02367 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 158 IPR001563 GO:0004185|GO:0006508
Viun6g02367 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Viun6g02367 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 147 IPR001563 GO:0004185|GO:0006508
Viun6g02367 485 Pfam Serine carboxypeptidase 54 481 IPR001563 GO:0004185|GO:0006508
Viun6g02367 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 469 IPR001563 GO:0004185|GO:0006508
Viun6g02367 485 FunFam Serine carboxypeptidase-like 11 44 485 - -
Viun6g02367 485 SUPERFAMILY alpha/beta-Hydrolases 50 484 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02367 Viun-Chr6 28980127 28984505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02367 46 73 Calmodulin-binding Proteins AT2G22960 75.000 4.85e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02367 K16296 - gmx:100792006 785.408