Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02366 ATGTCAGAGTATGAGTATGGGTCACTGAAAATGGCAAAGCTTAGTTCAAGTTGCAGCACTGGTTATGTTTTGGCTCATTACAGGATTCCACTTCCCCTTCTTCTCTTATCACAATTCTTCTTTCAACTTTCATGGTGTGGCTCCACAGTTAAGTTCCTTCCTGGATTCGAGGGACCTCTTCCTTTTGTTCTTGAAACCGGATATGTGGGAGTGGGTGAATCAGAGGATGTGCAGGCATTCTACTACTTCATTGAGTCAGAGAACAGTCCAAAGGACGATCCTCTCATGCTTTGGCTCACTGGTGGCCCTGGTTGTTCAGCCCTCTCTGGTCTTGTCTTTGAAATAGGTCCACTTGGTTTTAAACATGAAGAGTATAATGGAAGCCTCCCAAATTTGTTCTTGAGGCCACACTCATGGACAAAGGTTAGTAGCATTATATTTGTAGACTTGCCTGTTTCTACAGGCTTCACTTATGCCACCACAAAATCGGCTACTCAACGAAGTGATTCCACACTAGTTCTCCAAGTCCATCAATTTCTTAGGAAGTGGTTGATTGATCATCCAAATTTTTTGACAAATGAAGTTTACATTGGTGGCGATTCATATTCTGGAATTCCTGTTCCAGCAGTGGTTCAAGAAATTTCCCGAGGAAATCAGAAAGGCGTTCAACCATGGATAAATCTCCAGGGTTACCTGCTAGGGAATGCACTAACAACTCGAAGAGAAGAGAACTATCAAATTCCCTTTTCTCACGGAATGGCACTTATATCTGATGAACTATACGAGGCTATATCAGGAATTTCAGACACGTATATTTTGGAGCCAAAGTGCGAATGGCTTGATACGGACACATCTCAGAGGATATCACTAATTAAGAAATATCCCGCCAACAAGCTCTCAGATACTCATCTCAATTTGCCACCCTTAAGCTGTGGAACTTATGTATACTTCCTCTGCGGTTTTTGGGCCAATGATGACAATGTTCGCAGTGCACTGCATATCCGCAAGGGAAGTATAGGAAAATGGCGTCGGTGTACCTTGGATATACCTCACGATATGGATATTCCAGAAAGCTATGGGTATCATGTAAACCTTAGTAGAAAAGGTTATCGTTCACTGATATACAGTGGCGACCATGACATGAAAATAGCTTTCTTGGCAACTCAGGCATGGATAAGATCTTTGAACTACTCCATCGTAGATGATTGGAGGCAATGGTATACAGATGGCCAAGTTGCAGGATACACAAGAACTTACTCCAATCGTATGACATTTGCAACTGTGAAGGGTGGAAGCCACATAGCTCCAGAGTCCAATCCTAAAGAATGCTTTGCTATGTTCAGTAGATGGTTATCTAAGAGGCCTTTGTAG 1371 0.4252 MSEYEYGSLKMAKLSSSCSTGYVLAHYRIPLPLLLLSQFFFQLSWCGSTVKFLPGFEGPLPFVLETGYVGVGESEDVQAFYYFIESENSPKDDPLMLWLTGGPGCSALSGLVFEIGPLGFKHEEYNGSLPNLFLRPHSWTKVSSIIFVDLPVSTGFTYATTKSATQRSDSTLVLQVHQFLRKWLIDHPNFLTNEVYIGGDSYSGIPVPAVVQEISRGNQKGVQPWINLQGYLLGNALTTRREENYQIPFSHGMALISDELYEAISGISDTYILEPKCEWLDTDTSQRISLIKKYPANKLSDTHLNLPPLSCGTYVYFLCGFWANDDNVRSALHIRKGSIGKWRRCTLDIPHDMDIPESYGYHVNLSRKGYRSLIYSGDHDMKIAFLATQAWIRSLNYSIVDDWRQWYTDGQVAGYTRTYSNRMTFATVKGGSHIAPESNPKECFAMFSRWLSKRPL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02366 456 Pfam Serine carboxypeptidase 54 452 IPR001563 GO:0004185|GO:0006508
Viun6g02366 456 FunFam Serine carboxypeptidase-like 19 45 276 - -
Viun6g02366 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 147 IPR001563 GO:0004185|GO:0006508
Viun6g02366 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 158 IPR001563 GO:0004185|GO:0006508
Viun6g02366 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Viun6g02366 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Viun6g02366 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 440 IPR001563 GO:0004185|GO:0006508
Viun6g02366 456 SUPERFAMILY alpha/beta-Hydrolases 50 455 IPR029058 -
Viun6g02366 456 Gene3D alpha/beta hydrolase 59 455 IPR029058 -
Viun6g02366 456 FunFam Carboxypeptidase 310 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02366 Viun-Chr6 28980126 28984505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02366 46 73 Calmodulin-binding Proteins AT2G22960 75.000 5.56e-08 50.8