Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02337 ATGGAGCAAAACCAGCATGGTCAGCCAGGAAAAGGAATCGGTTCTGCTCCTGCACAAGAAGCACATAACAAGAACCAAAATCAGTCCAACCCTAACAATCCTCCTATTCAGACCGTTGGTTCTTCTGTTCCTTCATCCTATGGTCTCCGATGCAATTACCGACACCAGCAACAGCAGGATCAGATGGAGGAAAAAGTGAAGAGCTTTTGGGCACAACAACGGAAGGAAATTGAGGAGAGCACTGATATAAGGAGTCAACACAGTGTGCCTCTGTCGAGGATTAAGAAGATCATGAAGACTGATCCAGATGTGAAGTTGGTTGCAGCGGAGACTCCTGTGGTGTTCTCCAAGGCCTGTGAACTGTTCATAATGGAGCTCACAATGAAGGCTTGGGCTAACGCCGAGGACAACAATAGGAGGACAATCAAGAAGTGTGACATTGCATCTGCAATCGCAAAGACTGATGTGTTTGATTTTCTTGATGATATTGCTCCCCTTCCTGGGAATCACAAAAACACAGTGATGGATCCATTGGTTGCAGGCAATGCTCCAACACCAACCCAGAATGTTCCTTATATGCCACCTCCTCAACATGTTGCAGGCCCACCACCACCCTATGTTGCTCCTACAACTCTTCATCAGCAAAACCCTCCTCCTAGTTCAGATGATTGA 672 0.4673 MEQNQHGQPGKGIGSAPAQEAHNKNQNQSNPNNPPIQTVGSSVPSSYGLRCNYRHQQQQDQMEEKVKSFWAQQRKEIEESTDIRSQHSVPLSRIKKIMKTDPDVKLVAAETPVVFSKACELFIMELTMKAWANAEDNNRRTIKKCDIASAIAKTDVFDFLDDIAPLPGNHKNTVMDPLVAGNAPTPTQNVPYMPPPQHVAGPPPPYVAPTTLHQQNPPPSSDD 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02337 223 Gene3D Histone, subunit A 50 165 IPR009072 GO:0046982
Viun6g02337 223 SUPERFAMILY Histone-fold 22 160 IPR009072 GO:0046982
Viun6g02337 223 MobiDBLite consensus disorder prediction 1 48 - -
Viun6g02337 223 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 88 151 IPR003958 -
Viun6g02337 223 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 38 168 - -
Viun6g02337 223 MobiDBLite consensus disorder prediction 188 212 - -
Viun6g02337 223 FunFam Nuclear transcription factor Y subunit gamma 53 166 - -
Viun6g02337 223 MobiDBLite consensus disorder prediction 175 223 - -
Viun6g02337 223 MobiDBLite consensus disorder prediction 19 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02337 Viun-Chr6 28678741 28680751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02337 68 217 CCAAT-HAP5 Transcription Factor Family AT1G54830 45.062 1.99e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Viun6g02337 CBFD_NFYB_HMF 1.8e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02337 K08066 - vum:124832126 333.183