Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02326 ATGGAAAACTTCACCTGTTCTCCCTCTCCTCTGTCAGCCATTCCATCCATTTCAGCTCCATCTTCTTCTGCACCTTTCGACGACTCTTTTGAAGACTCCTGCAGTATATGCCTAGAGTCCTTCACCATTCACGAACCATCCACTGTTACTAATTGCAAACATGAATATCATCTGCATTGCATTCTTGAGTGGTCACAAAGAAGCCAAGAGTGCCCAATTTGTTGGCAATCCCTTGCTTTGAAAGACCCTGCCAGCCAAGAGCTTCTAGCTGCAGTTGAAGTTGAAAAACGCTTGAGATCAAGAAAGATGACTACTTTTCGTACCCGCCTTGAACAGTATGCCTATGAGGATGACTTTTTCTCAGACGACTCTGATTCTGATGACCAGATTATGAGGCGCCTAGTTGCTGCTGCAAATAGATCTCGTCTTGTTCAGAGACAGGAAAGGAATAGATCACCTGGTGCTGGTCCATCAGATGTTCTTGATATTAACTCTTCCATACATGTATCTGGGGTGCAAACAATTTCACCATCTTCGGGTCCTGCCTCTGGAGTAACATCTACATTTAACAGTCAACCTCCGGTATCAAACACTACATCCGAAAGTGCAAACCGACCAAACACTTATGAGATGTTTTCCTTCCCAGAATCCTTCAAATCCAAATTTTCTGCTGCTTCAACCAGATATAAGGAATCAATTTCAAAAGGTACACGGGGCCTCAAAGAGAAGTTACTTGCCCATAATGTCTCAGTAAAAGAGCTGAGTAAAGGTGTTCAGCGTGAGATGAATGCAGGCATTGCTGGAGTTGCACGGATGATTGAACGCCTTGATCTTTCAAAACGGTCCAATTCTCCTATCATTCCAATCCATAGTGAGGGAACTTCAGACTTCCCAAAGGAAGGGAAGAAGTATGTTGGAGAGAATGGCATTGGGGGTTCTCCAAGTAAAGAGAGTGAAGGTGCAGTTCACGATGTTAGTTCAGATGTCCCATTTGTCACAGGCGTTCAATCTTTTGGTCCAGGGTGGAAATGA 1032 0.4409 MENFTCSPSPLSAIPSISAPSSSAPFDDSFEDSCSICLESFTIHEPSTVTNCKHEYHLHCILEWSQRSQECPICWQSLALKDPASQELLAAVEVEKRLRSRKMTTFRTRLEQYAYEDDFFSDDSDSDDQIMRRLVAAANRSRLVQRQERNRSPGAGPSDVLDINSSIHVSGVQTISPSSGPASGVTSTFNSQPPVSNTTSESANRPNTYEMFSFPESFKSKFSAASTRYKESISKGTRGLKEKLLAHNVSVKELSKGVQREMNAGIAGVARMIERLDLSKRSNSPIIPIHSEGTSDFPKEGKKYVGENGIGGSPSKESEGAVHDVSSDVPFVTGVQSFGPGWK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02326 343 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 28 83 - -
Viun6g02326 343 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 148 IPR013083 -
Viun6g02326 343 MobiDBLite consensus disorder prediction 287 326 - -
Viun6g02326 343 ProSiteProfiles Zinc finger RING-type profile. 34 74 IPR001841 -
Viun6g02326 343 MobiDBLite consensus disorder prediction 143 162 - -
Viun6g02326 343 SMART ring_2 34 74 IPR001841 -
Viun6g02326 343 Pfam Ring finger domain 32 74 IPR001841 -
Viun6g02326 343 MobiDBLite consensus disorder prediction 171 208 - -
Viun6g02326 343 SUPERFAMILY RING/U-box 31 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02326 Viun-Chr6 28625174 28628152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02326 28 82 C3H Transcription Factor Family AT4G00335 45.455 4.04e-13 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02326 6 28625174 28628152 Viun6g02326 6 28625174 28628152 ECH