Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02195 ATGCAAACGTCCCAGAAACACCCAACTTCATCCGGTATCCATTTATACCACCAGCCTGTGCAAAACATCGATCCCTACACTCGTTACCAAGTATTGCAAAGCAATTCTTGCCATGAAATCCATGATAGCAACAGTCAGGGAACCACTATCTCGTTCGAACCCTGCAAGGAGCAATACTTTACCCTTGAATCATCCCCACCACTCAATGATCTCATAGGTTGTGATTCTCCTTCCTATGCTAGTGCATCGTCCAGTTCCAATAGGAGTCCTTTTTCTCCACATGTTTCTCATTCATACCATTCAGACCAGCATCAGTCATCTGACAACAACTATGGATCACCAACAAGTGCACACTCTAGTGCTGATGATAGCTACGAGCTGAAGCACAAGCTGAGAGAACTCGAGATTTCACTGTTGGGGCCTGATTCAGGTATTGTTGACAGTTGTCAGTGCTGCTACGAGGGTGGCCACCACGGAGCATCGTCAATGGCTAAATACAATTGGGATCAGGTTGTAGAAATGATTCCAAAACTAGACTTGAAAGAAGTCCTGAACCGGTGTGCACAGGCTGTGTCCGATGGTGATATTGAAACAGCGGTGGGATTTATGAATAATGTATTGCCAAAGATGGTATCAGTGGGGGGTGACCCAATCCAGAGGCTAGGGGCCTACATGTTGGAGGGTCTAAGAGCAAGGTTGGAGTCTTCGGGGAGCCTAATCTACAAAGCCTTGAAATGTGAACAACCAGCAGGAAAAGATCTCATGAGTTACATGCACATCTTGTACCAGATTTGCCCATATTTTAAGTTTGCTTATGTCTCTGCGAATGCTGTCATTGGAGAAGCAATGGTAAATGAATCAAGAATCCACATAATTGACTTCCAAATTGCACAGGGCACTCAGTGGATGCTGCTTATCCATGCTCTCGCGTCTCGTCCTGGTGGACCACCTTTCATTCGTGTAACTGGTGTCGATGATTCCGAATCCTTTCATGCAAGAGGAGGAGGACTTGACATTGTAGGAAAACGCCTCTCAGATTATGCCAAATCTCGTGGAGTTCCATTTGAGTTCCACAGTGCTGCAATGTCTGGATGCGAGGTTGAACTAGAAAACCTCGTGGTTGTACCGGGGGAAGCTCTGGCTGTGAATTTCCCTTATGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACAGAGAACCACAGGGACAGGCTATTAAGACTGGTCAAGAGCTTGTCACCCAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCCCCATTTTTCCAGAGGTTTGTTGAGACCTTGAGTTATTACAGTGCAATGTTTGAGTCCATAGACGTGGCCCTGCCCAGAGAGGATAAGCAGAGGATCAGTGCTGAACAACACTGCGTGGCTCGTGACATTGTTAACATGATAGCTTGTGAGGGCCCTGAGAGGGTGGAAAGGCATGAACTTTTGGGGAAGTGGAGGTCAAGATTTTCAATGGCTGGTTTTGCAGCATGGCCTTTGAGTTCCTCGGTCACTAATGCAGTTAGAAATATGTTAAGAGAATTCAATGGAAATTATAGGTTAGAACATAGAGATGGTGCGCTCTATTTAGGATGGAAGAGAAGAGCCCTGTCCACATCTTCTGCCTGGAGATGTTACTGA 1662 0.4615 MQTSQKHPTSSGIHLYHQPVQNIDPYTRYQVLQSNSCHEIHDSNSQGTTISFEPCKEQYFTLESSPPLNDLIGCDSPSYASASSSSNRSPFSPHVSHSYHSDQHQSSDNNYGSPTSAHSSADDSYELKHKLRELEISLLGPDSGIVDSCQCCYEGGHHGASSMAKYNWDQVVEMIPKLDLKEVLNRCAQAVSDGDIETAVGFMNNVLPKMVSVGGDPIQRLGAYMLEGLRARLESSGSLIYKALKCEQPAGKDLMSYMHILYQICPYFKFAYVSANAVIGEAMVNESRIHIIDFQIAQGTQWMLLIHALASRPGGPPFIRVTGVDDSESFHARGGGLDIVGKRLSDYAKSRGVPFEFHSAAMSGCEVELENLVVVPGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLSYYSAMFESIDVALPREDKQRISAEQHCVARDIVNMIACEGPERVERHELLGKWRSRFSMAGFAAWPLSSSVTNAVRNMLREFNGNYRLEHRDGALYLGWKRRALSTSSAWRCY 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02195 553 ProSiteProfiles GRAS family profile. 171 551 IPR005202 -
Viun6g02195 553 Pfam GRAS domain family 180 551 IPR005202 -
Viun6g02195 553 MobiDBLite consensus disorder prediction 83 124 - -
Viun6g02195 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 114 544 IPR005202 -
Viun6g02195 553 MobiDBLite consensus disorder prediction 83 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02195 Viun-Chr6 27741277 27744983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02195 1 551 GRAS Transcription Factor Family AT4G17230 59.239 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun6g02195 GRAS 3.9e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02195 - - gmx:100819190 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02195 6 27741277 27744983 Viun6g02195 6 27741277 27744983 ECH
Viun3g06056 3 64329198 64331992 Viun6g02195 6 27741277 27744983 PCT