Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02186 ATGTCTGGTGGGGAGGTAGGTGGTGGGGGTGTTTTTGTGGCGTGGGAGGAGCAGGTGATATGCCAGGAGCGTGGGAACCGAGTGATTCACTTCTATCTGAAGGATGCGTTGGGGAATTCGGTGCTGGCCGTTGTGGGGACCGAGAGGAGTGTGAGGCACATGATGTATGTTGTCCCTGACCATTTCTTGCAGGCCTATGGATCCACACAGCCAATCAATGCCTGCAAGTGGAGGGCGCGGCGTGAGGTTGTTGACTGGCTTACTTGTTTGGTCTCCAGGAATCGGTCACACCATGCAGGTGTACAATTGGATGAATTAGCACAAGCTGATGAATCTCTCAAGATTTTAGTGCCTGGAATTAATGTTAGTAATAAGATTTTACCTGATAAAATGATTTCTAGGAAACTAAAATTCCAAAGTTCGGATATTGAATGGTCAGGCAGTCCTTGGTTTTGTGCTAAACAGCTGAAGCACTACTCAGGGTTTTGTAGGAACGGAACAGCCATAAATGTCCACTCATTTGTATATATTATGGCTGAAGAAGAAAACCACTATCTTGGTTACTTGGAAGATATGTATGAAGACAAGAAGAGACAAAAAAAGGTGAAGGTGCGTTGGTTTCATCATGGTCAGGAAGTTAAGCAGGTGATTCCACAGCTGATTCTGCAAGAGGGAGAGGTTTTCATCACACCTCATGTTCAGGTGATCAGCGCTGAGTGTGTCAATGGTCCTGCCACTGTTTTGACTCCTAAGCATTATGAGAAATACCTGGCTGCTGTGCCTCATACATCTTTATCCGAGATCCATACATGCTTTAGGCAGTTTAAAAACAATAGGCTTAAGCCCTTCACGCTTACAAAGTTGCGTGGGTATAGTAACCAGCCTGTTCTTTCTTGTTTAAATAGTCCTATTCTCTCCAAGAGAAAGGCAAAGTTTGAAAAGTCACACACAGATGATGATGAGAACTTCACTCAAGACGATCCTTTAAGGTCCAGCAATAAGAGGATTAGAAGTTCTAAGGATCACATATTTGAGAAGGGTTTTCCTGGTCTGCAAATGACAAAATGTGGACTGAAATATCCTAGTTTAAAATTAAAACTATCAAGAAAAACAGTAGGTATTAAGGTTATTGGACCAAAGCCTAAACTGTCTTTTCAGGTCGGTGCTAAGATAGAGGTTCTTTGTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTAAAATCTTGAGCATGTCTGCGAGGCTGCTGAAGGTCCAGTATGATGATTTGCTTGATATAGACGGAGCACAGAAACTAGAGGAATGGGTCCCTGCATCTAGAGTGGCAGCTCCTGATAAATTGGGTATGCGATGTTCAGGCCGCTTAACAGTCCGGTCATGCCCTCCTGAATACAATTCAGATCGTACTTTTGAGATTGGAGCAGCAGTGGATGCCTGGTGGTCTGATGGATGGTGGGAAGGCGTCATAACTGCAGTTAATGTCAGTGGAGATGGAATCCTGCAAGTTTATACCCCTGGTGAAGAGAGGTTCCTGAAGGTCGATCAGAAGAACATTCGGATTTCCCGAGATTGGATCAATAACAGATGGATTGATATACGAGGAAAGCCTGACATTTGCACTTATTTAACTTCAAATGTCAGGTCCAGCATCGGGATGTCAGCTAATTCTGCAGTGGTGGTTGGATCCATGTCTGATTGCTCTGCTTTAGAAAGTAAATCATCATCAATTCCCAAAGTTGAACTTTCTAAGAAGGTTGAGCCAGAATCGTCTGGTTTGGAAATCCCTGTTGATCTGGAAAATATGAAGGGAATAACTCTGAGGGAGCCACTCTATGCCATTCATGAGGACAAGGATAACTCTGGTGGTGGCTGTGATGAAGCTGACAAAGCTGTGAAGACAATTCTGACCTTCAATGAACACAAGGACAATAACTCTTGTAGCGGCAGTGATGATGAAACTGAGGATGATGATAATGTCAATGGTGATGATGTTGACAACGGGGAGGCAAGTAAGGAAAATTTTGATTGTTGTGAACCAAAACTTGATGCAGCAGAAGCAATACAAGTGCATGATGAATAA 2082 0.4347 MSGGEVGGGGVFVAWEEQVICQERGNRVIHFYLKDALGNSVLAVVGTERSVRHMMYVVPDHFLQAYGSTQPINACKWRARREVVDWLTCLVSRNRSHHAGVQLDELAQADESLKILVPGINVSNKILPDKMISRKLKFQSSDIEWSGSPWFCAKQLKHYSGFCRNGTAINVHSFVYIMAEEENHYLGYLEDMYEDKKRQKKVKVRWFHHGQEVKQVIPQLILQEGEVFITPHVQVISAECVNGPATVLTPKHYEKYLAAVPHTSLSEIHTCFRQFKNNRLKPFTLTKLRGYSNQPVLSCLNSPILSKRKAKFEKSHTDDDENFTQDDPLRSSNKRIRSSKDHIFEKGFPGLQMTKCGLKYPSLKLKLSRKTVGIKVIGPKPKLSFQVGAKIEVLCQDSGIRGCWFRCKILSMSARLLKVQYDDLLDIDGAQKLEEWVPASRVAAPDKLGMRCSGRLTVRSCPPEYNSDRTFEIGAAVDAWWSDGWWEGVITAVNVSGDGILQVYTPGEERFLKVDQKNIRISRDWINNRWIDIRGKPDICTYLTSNVRSSIGMSANSAVVVGSMSDCSALESKSSSIPKVELSKKVEPESSGLEIPVDLENMKGITLREPLYAIHEDKDNSGGGCDEADKAVKTILTFNEHKDNNSCSGSDDETEDDDNVNGDDVDNGEASKENFDCCEPKLDAAEAIQVHDE 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02186 693 MobiDBLite consensus disorder prediction 665 679 - -
Viun6g02186 693 MobiDBLite consensus disorder prediction 642 679 - -
Viun6g02186 693 CDD Tudor_Agenet_AtDUF_rpt1_3 385 442 - -
Viun6g02186 693 ProSiteProfiles BAH domain profile. 167 286 IPR001025 GO:0003682
Viun6g02186 693 SMART agenet_At_2 469 527 IPR014002 -
Viun6g02186 693 SMART agenet_At_2 383 448 IPR014002 -
Viun6g02186 693 Gene3D - 134 281 IPR043151 -
Viun6g02186 693 MobiDBLite consensus disorder prediction 650 664 - -
Viun6g02186 693 MobiDBLite consensus disorder prediction 311 332 - -
Viun6g02186 693 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 383 578 - -
Viun6g02186 693 SMART BAH_4 167 286 IPR001025 GO:0003682
Viun6g02186 693 Pfam Agenet domain 388 463 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02186 Viun-Chr6 27674220 27683568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02186 397 525 PHD Transcription Factor Family AT5G58610 28.571 1.02e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02186 - - vun:114188137 1397.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02186 6 27674220 27683568 Viun6g02186 6 27674220 27683568 ECH