Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02183 ATGACGTCAATACCTTCTAAAAACCTATGTGTTCGAAGGCAACAATGTCCTTGTGGAGATTGGAAGTGTTATATTACATATGAGGGTGATTCTGAAGAGGGTTCTACGGCACCTGAATTGGTGAAGGAAGAGAAAGCATCGTCCGGGGCTATGATTACTCCCTATGTTGGAATGGTTTTTAAGAGTGATGATGATGCTTTTGAGTATTATGGCAACTTTGCTAGGAAGAATGGGTTCTCTATTAGGAAGGAAAGGTCTAGAATTAGCCCGCAGTTGGGGATTTACAAGCGTGACTTCGTTTGCTACCGGTCCGGCTTTGCTCCGGTGAAGAAGAAGCCTAATGGAGAACACCATAGAGATAGGAAATCAGTGAGGTGTGGATGTGATGCAAAGATGTATCTGTCCAAGGAGGTTGTAGAAGGGGTTTCCCAGTGGTTTGTTGTGCAGTTTAGTAATGTGCACAATCATGAACTTTTGGAAGATGATCAAGTGCGTCTTTTGCCCGCGTATCGTAAAATTCATGAGGCTGATCAAGAGCGTATACTCTTGCTCTCCAAGGCAGGGTTTCCAATTCATCGGATAGTGAAAATGCTGGAGCAGGAAAAGGGGATTCAGGGGGGGCAGCTGCCTTTCTTGGAAAGGGATGTGAGGAACTTTGTTCAAAACCGCAAAAAGGTTGTTCTAGAGAATGAGGCATTGCTCAGTGAGAAAAGAGAAAATGATGTTTTGGAACTTCTTGAGGCGTGCAAAGTTATGAAAGAAGCAGATGATGAGTTTATGTATGATTTTACTGTGGATGGGAATGATAAGGTTGAAACTGTAGCTTGGTCATATGGCGACTCAGTTAATGCAAATGCTATGTTTGGAGATGTGGTTTATTTTGACACATCTTATAGATCGGTCACTTATGGATTGCTTTTTGGAGTATGGTTTGGTATCGATAGCTATGGTAGAACTATTTTTTATGGTTGTGTTTTGTTGCAGGATGAAACACCTCAATCCTTCTCATGGGCATTACAGACTTTTGTCAGATTCATGAGAGGAAGGTGTCCACAAACTATTCTAACTGATCTAGACCCGGGACTTAGAGATGCGATTATAAGTGAATTTCCAGGAACTAAACATGTTGTCCCTCAATGGAATATTCTACACAAGGTACCCTGTTGGTTTTCTCCTACTCTGGGTTCTCGGTATGCAGAATTTAAATCTGAGTTCGATGCCTTATTTCACATTGAGAATACAGAGGAATTTGAACATCAGTGGAGCCAGATGATTTCTGTGTTTGGACTTGGTTCAGATAAACATGCTGATTTACTATATACTGTTCGGGCATCCTGGGCTGAAGCCTATGTAAGAGGTTACTTTCTGGCTCGAATGGCGACAATAACTTACTCAAAGTCTATAGATGCATTTTTGAAAGGGATTTTCTCTGCTCATACGTGTTTGCGTAGCTTTTTTGAGCAGGTTGGAATTTCTGCAAGTTTTCAACATCAAGCATTTAAGGAGACTCAATATATTCAGCTGAAAACTTGCATACCGATTGAAGAGCATGCGCGGAGTATTCTCACTCCTTTCGCTTTTAATGCCTTGCAGCAAGAGCTGTTGCTAGCTATGCAATATGCTGCATCCGAAATGGCCAATGGATCATATATTGTGCGGCATTTCAAAAGGATGAACGGAGAACGGCTTGTAATATGGTTGGTTGAAGATGATCAGATACATTGTTCTTGCAAGGAATTTGAATCCTCAGGGATACTATGCAGGCATGCTCTTCGTGTATTTGTAATAAAGAACTACTTTCAGTTACCTGATAAGTACTTTTTAGGTAGATGGAGGCGGGAATGCTCATTACTTGTTGATGATGATAACAATCAAGGTGTTGGAGGGGAATGGTTTCAAGAATATCAGTCCCTGGCTGAAACTTTATTTCAAGAATCATCAATTACAAAGGAGCGATCTGACTATGTGCGTAAAGAACTGACAAAAGAACTTAATAGGATTCTTAACGAGGTTAGAAATCTCCCTGAGGCTGATGGAGTCTGCATGAACATGTCAGTTTCACCAACCAATTAG 2073 0.4115 MTSIPSKNLCVRRQQCPCGDWKCYITYEGDSEEGSTAPELVKEEKASSGAMITPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRISPQLGIYKRDFVCYRSGFAPVKKKPNGEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLEQEKGIQGGQLPFLERDVRNFVQNRKKVVLENEALLSEKRENDVLELLEACKVMKEADDEFMYDFTVDGNDKVETVAWSYGDSVNANAMFGDVVYFDTSYRSVTYGLLFGVWFGIDSYGRTIFYGCVLLQDETPQSFSWALQTFVRFMRGRCPQTILTDLDPGLRDAIISEFPGTKHVVPQWNILHKVPCWFSPTLGSRYAEFKSEFDALFHIENTEEFEHQWSQMISVFGLGSDKHADLLYTVRASWAEAYVRGYFLARMATITYSKSIDAFLKGIFSAHTCLRSFFEQVGISASFQHQAFKETQYIQLKTCIPIEEHARSILTPFAFNALQQELLLAMQYAASEMANGSYIVRHFKRMNGERLVIWLVEDDQIHCSCKEFESSGILCRHALRVFVIKNYFQLPDKYFLGRWRRECSLLVDDDNNQGVGGEWFQEYQSLAETLFQESSITKERSDYVRKELTKELNRILNEVRNLPEADGVCMNMSVSPTN 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02183 690 Pfam MULE transposase domain 291 384 IPR018289 -
Viun6g02183 690 SMART 26again6 573 600 IPR006564 GO:0008270
Viun6g02183 690 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
Viun6g02183 690 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 664 IPR031052 GO:0006355
Viun6g02183 690 Pfam SWIM zinc finger 569 594 IPR007527 GO:0008270
Viun6g02183 690 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02183 Viun-Chr6 27656363 27659233 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun6g02183 MULE 3.9e-14 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02183 - - gmx:100817107 1323.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02183 6 27656363 27659233 Viun6g02183 6 27656363 27659233 ECH