Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02166 ATGAAAAATCAAGGTTCAGAATTTTACCGAAAGAGCTCGGCTTTGGATGCGGAGGATGAAGAGGAGAATGATGAGAATTCATCAACAAGCACTGAAGGAAATGGCCCTAGAAAGAGGAGGAGAAAGACGGTGAGAAAGCTTGAAGTTTTTGTGAAGAATTTGGTGACAAAGGTGATGGAGAAGCAGGAACAGATGCACAAACAGTTGGTGGAAATGATAGAAAAGAAGGAAAGGGAAAGGATAAAGAGAGAAGAAGCTTGGAAGAATGAGGAGATGGAGAGAATTAGAAAAGAGGAAGAGGCTAGGGCCGAAGAAAAGTCTCGGAATTTGGCCCTGATATCCTTCATTCAGAATCTGTTGGGCCAGGAGATTGAAATCCCCCAAGCAGTAGAAGCATGCAGCAAAAGAGAAGAGGGAGAAGTTGAAGTGAATGGTCATAAAGAATTGAATAGTGATCCTAGTAAGAGTAGATGGCCTGATGTTGAAGTGCAATCACTTATCACAGTGAGAACTTCATTGGAGCACAAGTTCCGTTTCATGGGATCAAAAGGGTCAATATGGGAGGAGATATCTGAAGCAATGTATGGGTTGGGCTATAATCGCTCTGCCAAGAAGTGTAAGGAGAAGTGGGAAAACATCAACAAATACTATAAAAGGACAATAGGGAGTGGCAAGAAGAGGCGTCAAAATAGTAAAAGTTGCCCTTATTTTGATGAGTTGGACATTCTGTATAGAAATGGCCTCTTAAGTGTTGGAAATGCCTTGAGCAATACCACTGATGCTCCCCAGAATGAAGAAAAGGAGTAG 807 0.4201 MKNQGSEFYRKSSALDAEDEEENDENSSTSTEGNGPRKRRRKTVRKLEVFVKNLVTKVMEKQEQMHKQLVEMIEKKERERIKREEAWKNEEMERIRKEEEARAEEKSRNLALISFIQNLLGQEIEIPQAVEACSKREEGEVEVNGHKELNSDPSKSRWPDVEVQSLITVRTSLEHKFRFMGSKGSIWEEISEAMYGLGYNRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKSCPYFDELDILYRNGLLSVGNALSNTTDAPQNEEKE 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02166 268 Gene3D - 158 219 - -
Viun6g02166 268 MobiDBLite consensus disorder prediction 1 42 - -
Viun6g02166 268 CDD GT1 156 220 - -
Viun6g02166 268 FunFam Trihelix transcription factor GT-2 158 219 - -
Viun6g02166 268 ProSiteProfiles Myb-like domain profile. 150 214 IPR001005 -
Viun6g02166 268 Pfam Myb/SANT-like DNA-binding domain 156 241 IPR044822 -
Viun6g02166 268 Coils Coil 59 109 - -
Viun6g02166 268 PANTHER FI21293P1 19 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02166 Viun-Chr6 27574826 27576103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02166 38 246 Trihelix Transcription Factor Family AT5G47660 45.536 4.72e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun6g02166 Myb_DNA-bind_4 1.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02166 - - gmx:100820302 384.415