Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02165 ATGAGAGAGACAGAGACTGAGCCCACAACTTGCTCGGCTTTGGATGCGGAGGATGAAGAGGAGAATGATGAGAATTCATCAACAAGCACTGAAGGAAATGGCCCTAGAAAGAGGAGGAGAAAGACGGTGAGAAAGCTTGAAGTTTTTGTGAAGAATTTGGTGACAAAGGTGATGGAGAAGCAGGAACAGATGCACAAACAGTTGGTGGAAATGATAGAAAAGAAGGAAAGGGAAAGGATAAAGAGAGAAGAAGCTTGGAAGAATGAGGAGATGGAGAGAATTAGAAAAGAGGAAGAGGCTAGGGCCGAAGAAAAGTCTCGGAATTTGGCCCTGATATCCTTCATTCAGAATCTGTTGGGCCAGGAGATTGAAATCCCCCAAGCAGTAGAAGCATGCAGCAAAAGAGAAGAGGGAGAAGTTGAAGTGAATGGTCATAAAGAATTGAATAGTGATCCTAGTAAGAGTAGATGGCCTGATGTTGAAGTGCAATCACTTATCACAGTGAGAACTTCATTGGAGCACAAGTTCCGTTTCATGGGATCAAAAGGGTCAATATGGGAGGAGATATCTGAAGCAATGTATGGGTTGGGCTATAATCGCTCTGCCAAGAAGTGTAAGGAGAAGTGGGAAAACATCAACAAATACTATAAAAGGACAATAGGGAGTGGCAAGAAGAGGCGTCAAAATAGTAAAAGTTGCCCTTATTTTGATGAGTTGGACATTCTGTATAGAAATGGCCTCTTAAGTGTTGGAAATGCCTTGAGCAATACCACTGATGCTCCCCAGAATGAAGAAAAGGAGTAG 804 0.4279 MRETETEPTTCSALDAEDEEENDENSSTSTEGNGPRKRRRKTVRKLEVFVKNLVTKVMEKQEQMHKQLVEMIEKKERERIKREEAWKNEEMERIRKEEEARAEEKSRNLALISFIQNLLGQEIEIPQAVEACSKREEGEVEVNGHKELNSDPSKSRWPDVEVQSLITVRTSLEHKFRFMGSKGSIWEEISEAMYGLGYNRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKSCPYFDELDILYRNGLLSVGNALSNTTDAPQNEEKE 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02165 267 Coils Coil 58 108 - -
Viun6g02165 267 MobiDBLite consensus disorder prediction 12 26 - -
Viun6g02165 267 MobiDBLite consensus disorder prediction 1 41 - -
Viun6g02165 267 Pfam Myb/SANT-like DNA-binding domain 155 240 IPR044822 -
Viun6g02165 267 CDD GT1 155 219 - -
Viun6g02165 267 Gene3D - 157 218 - -
Viun6g02165 267 PANTHER FI21293P1 17 257 - -
Viun6g02165 267 FunFam Trihelix transcription factor GT-2 157 218 - -
Viun6g02165 267 ProSiteProfiles Myb-like domain profile. 149 213 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02165 Viun-Chr6 27574826 27576473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02165 37 245 Trihelix Transcription Factor Family AT5G47660 45.536 6.35e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun6g02165 Myb_DNA-bind_4 1.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02165 - - gmx:100820302 384.415