Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02147 ATGAATGGACGGAGAAGGGTGATGGGTTGGGGTACATTGGACTGTAATAACCTGACAGTCTCTGGGGCCCGAGGAGGTGTAACCAGGGATGTTACACATACGCTACAAGTATCAACCTCTTTAGGAGTTTCTGCAAGTTTGGGATCTATCATTTTACTCTTTATTTTATGGCGATTATTCAAAGTTACAAAAGAAGTCGTGGAGAAGGAATATAGAAAAAGATTCTTCAAAAGAAACGGAGGTTTATTGCTGCAACAAATTTTATCTTCTAATAAAGTTAGTGTAGATAAAGTCAAACTCTTTAGCTTAACAGAATTGGAAAAGGCCACTGATAACTTCAATACAAATAGAGTACTTGGAAGAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATAGACGGAACAATTATTGCAGTGAAAAAATTTAAAGTCCAAGGAAAGATTGAAGAATTCATCAATGAATTTGTCATCCTTTCACAAATTAACCATAGAAATGTGGTCAAGTTGTTAGGAAGTTGTTTGGAGACTAAGATTCCATTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTACTTGCATCAACAAAATGAGGATTTGCCATTAACATGGGACATGCGTTTGAGAATTGCCGCTGAAATTGCAGAAGCCTTATTTTACTTGCATTCTGCTGCTTCTCGACCTATTTATCATAAAGATATTAAGTCAACAAACATACTATTGGATGAAAAGTATAGGGCAAAAGTAGCGGACTTTGGTACATCAAGAATGATCTCCATGGATGTTACACACCTTACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATTTTTTCAAACTAGTCAATTCACAGAAAAAAGTGATGTCTACAGTTTTGGAGTAGTTCTTGTTGAACTCTTAACGGGGCAAAAACCAATAACCCTCCTAAATCCAGAAGAAGCCAAAGGTTTAGCTCCATATTTCATCACATGTGTGGAAGAAAATTGTGTGTTTGATATTATTGATGAAAGAGTGATGAAGGAAGGGAAAAAAGATGGTATCAGGGAAGTTGTCAATCTTGTAAGTAGATGTTTAAATTTGAATGGAAAGAGACGACCAACTATGAAGGAACTCACATTAGAATTAGAAGTTATCAGAAAATTAGAAAAAAAGTCCAATGCACAAGAAGATCATAATGAACTTGTTATAAGTGAAGATTATCAATATTGGGATGATAATTCTACTATCTTAGAAATTAAGTCAGTTTTTGATCTAAGTAGCAGAACACCAATCTTAGAAGATATTCATAGTCATACCATATAA 1320 0.35 MNGRRRVMGWGTLDCNNLTVSGARGGVTRDVTHTLQVSTSLGVSASLGSIILLFILWRLFKVTKEVVEKEYRKRFFKRNGGLLLQQILSSNKVSVDKVKLFSLTELEKATDNFNTNRVLGRGGQATVYKGMLIDGTIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETKIPLLVYEFIPNGNLFEYLHQQNEDLPLTWDMRLRIAAEIAEALFYLHSAASRPIYHKDIKSTNILLDEKYRAKVADFGTSRMISMDVTHLTTVVQGTFGYLDPEFFQTSQFTEKSDVYSFGVVLVELLTGQKPITLLNPEEAKGLAPYFITCVEENCVFDIIDERVMKEGKKDGIREVVNLVSRCLNLNGKRRPTMKELTLELEVIRKLEKKSNAQEDHNELVISEDYQYWDDNSTILEIKSVFDLSSRTPILEDIHSHTI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02147 439 Pfam Protein tyrosine and serine/threonine kinase 115 380 IPR001245 GO:0004672|GO:0006468
Viun6g02147 439 SMART serkin_6 113 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02147 439 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 52 392 IPR045274 GO:0007166
Viun6g02147 439 Gene3D Transferase(Phosphotransferase) domain 1 187 410 - -
Viun6g02147 439 FunFam Wall-associated receptor kinase 2 83 186 - -
Viun6g02147 439 ProSiteProfiles Protein kinase domain profile. 113 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02147 439 FunFam Wall-associated receptor kinase 2 187 404 - -
Viun6g02147 439 Gene3D Phosphorylase Kinase; domain 1 85 186 - -
Viun6g02147 439 SUPERFAMILY Protein kinase-like (PK-like) 94 382 IPR011009 -
Viun6g02147 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02147 Viun-Chr6 27425579 27427191 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02147 40 417 Receptor kinase-like Gene Family AT1G69730 57.218 4.07e-148 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Viun6g02147 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02147 - - vun:114188578 867.07