Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02140 ATGTCTCAAACCTTAACTCACACCATGCACCGTTCACCTCTTCAGCCGGAGAACAACCGCTACGGAAGAAGCAACAGCACCGTGAGTGAGATAGAGGAAGATAACTCTTCAGACTTGCCCTTCAATGATTCTCTGGTTACCATTAGCGAACAAGAGAAGAAGGAGGAGGAAGACACTGTTTATGTGGCCGTGGGAAAGAGTCCCAGCAGCATCGAAGCCTTGTCATGGACTCTCAACAACTTCACCACTCCATCTACCATTCTCTATCTCATACACGTTTTCCCAGAGATCAAACACCTTCCAAATCCATTGGGAGTGGGAATGATTCCAAAGGACCAAGTGAGTCCTGAGCAGGTAGAGAGCTACATGGCCCAAGAACGAGGCAAGAGAAGAGAACTCCTTAACAAATTCCTCCAACTATGTTCTGCTTCCAAGGTTAAGGTCGACACAATCTTGATTGAGAGTGACTTGATTGCAAAGGCTATCATCGACCTCATTCCCATTCTTCAAATAAGAAAACTAGTGATTGGAGCAAACAAATCCCAAATAAGAAAATTGAGATCAAGGAAAGGGAGTGGCATAGTTGATCAGATAGTTCAGAATGCTCCAGAAAGTTGCAATGTGAGTATTGTGTGTGATGGAAAAGAAGTAAATGAACAGATAGGTGGTGCCATTGCCAGTGATACTTCCATGTCCCAGAAAAACAAGCATCAGCAGAATGCATCGGTTTCGTGTGTTTGTTTCAACTTTTAA 753 0.4382 MSQTLTHTMHRSPLQPENNRYGRSNSTVSEIEEDNSSDLPFNDSLVTISEQEKKEEEDTVYVAVGKSPSSIEALSWTLNNFTTPSTILYLIHVFPEIKHLPNPLGVGMIPKDQVSPEQVESYMAQERGKRRELLNKFLQLCSASKVKVDTILIESDLIAKAIIDLIPILQIRKLVIGANKSQIRKLRSRKGSGIVDQIVQNAPESCNVSIVCDGKEVNEQIGGAIASDTSMSQKNKHQQNASVSCVCFNF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02140 250 Gene3D HUPs 58 211 IPR014729 -
Viun6g02140 250 MobiDBLite consensus disorder prediction 1 42 - -
Viun6g02140 250 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 17 249 - -
Viun6g02140 250 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 59 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02140 Viun-Chr6 27378847 27380596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02140 63 215 Plant U-box Gene Family AT5G57035 30.719 6.96e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02140 - - gmx:100777008 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g06011 3 64122115 64123298 Viun6g02140 6 27378847 27380596 PCT