Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02138 ATGGACTCAAAAACTAGCTCTAGATCTCTTCCGAAACACCATCAGAAGACGGCTGGAATTCAAACTCTTGAGGCAAAAGACAACTGGTCTTCAGGGAATCCAGCTTCCCTGAAAACAGGGAAAACGGAGCTGGCTGGTCCAGAGGATTTATCCAAGTCTGTAGGGAGCATGTCCAAGCAGAATACTGGGGAAACTGCTGAAAACAAGAAGTTAGGAGTTTCAATCCAAAAGGGGTCTGCCGAATCCTTGAGCAATAAAAGTAGTTCTGGTGCTTCTTCATCTGTTCTAGACAAGGCGGATCGTGCTGTTAATGAGAACATAGGGTCACAGGAAAGCTCCATTGACCAAGACAAAAAGACATCGGAATATGGAAGTGTAAAGAACAGTTCTGTTTCTGCCAAAGTTAGTGATGGGGCGAGCAGTCTTGCAAAGACAAGTGGAAGTGCCAAGATTAGTGACAGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTACAGAGGAAGCACGAGCAGTGATGTGAGTGATGAGAGTACTTGCAGTAGCTTTAGTAGCAGCATAAACAAACCTCACAAGGCAAATGACTTGAGATGGGAAGCCATTCAAGCAGTTCGAAGTAGAGATGGGGTGTTGGGATTAGGTCACTTTAGACTACTGAAGAGGCTGGGTTGTGGGGATATAGGCAGTGTTTATCTCTCTGAGTTGAGTGGAACTAAATGTTACTTTGCAATGAAGGTAATGGACAAAGGGTCCCTAGCGAGTCGCAAAAAGCTACTTCGTGCTCAGACAGAACGAGAAATCCTGCAGTCTCTTGATCACCCGTTTCTCCCAACTTTGTACACTCATTTTGAAACTGAGAAATTCTCATGTTTGGTAATGGAATTCTGCCCAGGTGGTGACCTCCATACTCTCAGGCAGAAGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTAAAATTTTATGTAGCAGAGGTCCTTCTGGCTTTGGAGTACCTCCACATGCTTGGGATTGTCTACCGTGACCTTAAGCCAGAAAATGTCCTTGTTAGGGACGACGGACATATTATGCTCTCTGACTTTGATCTTTCCCTCCGATGTGCCGTGAGTCCAACCCTTGTGAAAACCTCATCCACGGATTCTGAGCCTTTAAGAAAGAACCCTGTTTACTGTGTCCAACCTGCATGTATTGAACCACCTTCCTGCATCCAACCATCCTGTGTTGCCCCCACCACATGCTTTTCACCCCGCCTCTTCTCCAGCAAATCAAAGAAAGACCGAAAGCCAAAAACTGAAATTGGCAACCAAGTGAGCCCATTACCTGAGCTGATTGCAGAGCCTACCGATGCTAGGTCCATGTCATTTGTCGGAACTCATGAATACTTGGCACCTGAGATCATCAAGGGTGAAGGTCATGGCAGTGCAGTTGATTGGTGGACTTTTGGGATCTTTCTTTACGAGCTGTTGTTCGGAAAAACTCCTTTCAAGGGATCCGGCAACCGAGCCACACTGTTCAACGTCGTGGGTCAGCCGCTGCGTTTTCCAGAAGCACCTGTTGTGAGTTTTGCAGCAAGAGATCTCATAAGGGGGTTGCTTGTGAAAGAACCCCAGCACAGATTGGCATACAAAAGAGGTGCAACTGAGATAAAGCAACACCCTTTTTTTGAAGGTGTGAACTGGGCATTGATCAGATGTGCTACTCCACCTGAGATCCCAAAGGCTGTGGAGTTTGAGAAGATACCCTCCCCAGCCTCATCAGGTGGTGCTGGTGAAAAGGCTGTTAATCACATGTCAATAGCTAATCAGAAAGGTTCTGATAATTATCTGGAGTTTGATTTCTTCTAG 1842 0.4609 MDSKTSSRSLPKHHQKTAGIQTLEAKDNWSSGNPASLKTGKTELAGPEDLSKSVGSMSKQNTGETAENKKLGVSIQKGSAESLSNKSSSGASSSVLDKADRAVNENIGSQESSIDQDKKTSEYGSVKNSSVSAKVSDGASSLAKTSGSAKISDRADFVESGKSSIYRGSTSSDVSDESTCSSFSSSINKPHKANDLRWEAIQAVRSRDGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSSTDSEPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPASSGGAGEKAVNHMSIANQKGSDNYLEFDFF 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02138 613 MobiDBLite consensus disorder prediction 53 69 - -
Viun6g02138 613 SMART serkin_6 216 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02138 613 Pfam Protein kinase domain 217 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02138 613 Pfam Protein kinase domain 451 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02138 613 FunFam Serine/threonine-protein kinase AGC1-7 447 572 - -
Viun6g02138 613 MobiDBLite consensus disorder prediction 12 38 - -
Viun6g02138 613 Gene3D Phosphorylase Kinase; domain 1 214 299 - -
Viun6g02138 613 MobiDBLite consensus disorder prediction 123 145 - -
Viun6g02138 613 Gene3D Transferase(Phosphotransferase) domain 1 448 572 - -
Viun6g02138 613 CDD STKc_phototropin_like 215 572 - -
Viun6g02138 613 ProSiteProfiles Protein kinase domain profile. 216 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02138 613 MobiDBLite consensus disorder prediction 75 95 - -
Viun6g02138 613 Gene3D Transferase(Phosphotransferase) domain 1 300 375 - -
Viun6g02138 613 FunFam serine/threonine-protein kinase D6PK-like 300 367 - -
Viun6g02138 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Viun6g02138 613 FunFam Serine/threonine-protein kinase D6PK-like 214 299 - -
Viun6g02138 613 SUPERFAMILY Protein kinase-like (PK-like) 191 573 IPR011009 -
Viun6g02138 613 MobiDBLite consensus disorder prediction 1 145 - -
Viun6g02138 613 PANTHER FLIPPASE KINASE 1-RELATED 62 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02138 Viun-Chr6 27371104 27374074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02138 40 613 AGC Kinase Gene Family AT5G47750 77.178 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun6g02138 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02138 K08286 - gmx:100781600 1083.17