Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02095 ATGTATCATTCAAAGAATGTTCCTAGTGCAAGTTTAGTTGGAGGTAATTCACTAGTTCATGGTCAGCACATAGATTGTGGTGGCAGCGCGATGGATCCTGGCAATGGAGGAAACAGTCATAGCAACAACTCTAATCTCACCTCAAAACAACGTCTACGGTGGACACATGAATTACATGAGCGCTTTGTTGATGCTGTGGCTCAACTTGGAGGGCCAGATCGTGCCACACCCAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGCTTGACCATATACCATGTCAAAAGCCATTTACAGAAGTACCGACTAGCAAAATATTTACCGGATTCCTCATCTGATGGGAAAAAGGCTGACAAGAAAGAAACTGGGGATGTGCTTTCCAATCTCGATGGTTCATCTGGGATGCAGATTACTGAAGCTCTAAAGCTTCAAATGGAGGTGCAGAAGCGATTACATGAACAATTGGAGGTGCAGAGACAGCTACAATTACGGATAGAAGCCCAGGGTAAATACCTGAAAAAGATAATCGAAGAACAACAGCGGCTCAGTGGGGTTCTTTCAGAGGCACCTGAGAGTGGGGTTGTGGCTGTGGTTCCGGGGGACGTGTGCCAAGAACCGGATAATAAGACCGACCCGTCTACCCCCGACCCGGAAAAGGCTGCCAAAGACCGAGTCCCAGCAAAGAGTCTTTCAATTGAATCTTTTTCATCACACCATGAACCATTGACTCCAGATTCTGGTTGCCATGTTGGTTCCCCTGCTGACAGCCCTAAAGGGGAGAGATCAACCAAAAAGCAACGGCTAAACATGGACGGATCGTATTCAAAGCCAGACATGGTGCTTCCACTTCAGATACTGGAGTCAAGTATGTCATCATACCAGCATCCTAGCACTGTTTTTCTTGGGCAAGAGCAATTTGATCCTTCAATGGGTATGTCTACCAGAAGTGGTGAGGAATTGGATAAGGTTGGTGGCAGTAATCTGTGA 987 0.4661 MYHSKNVPSASLVGGNSLVHGQHIDCGGSAMDPGNGGNSHSNNSNLTSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKETGDVLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPESGVVAVVPGDVCQEPDNKTDPSTPDPEKAAKDRVPAKSLSIESFSSHHEPLTPDSGCHVGSPADSPKGERSTKKQRLNMDGSYSKPDMVLPLQILESSMSSYQHPSTVFLGQEQFDPSMGMSTRSGEELDKVGGSNL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02095 328 MobiDBLite consensus disorder prediction 109 125 - -
Viun6g02095 328 MobiDBLite consensus disorder prediction 211 226 - -
Viun6g02095 328 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Viun6g02095 328 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Viun6g02095 328 Gene3D - 48 107 - -
Viun6g02095 328 MobiDBLite consensus disorder prediction 306 328 - -
Viun6g02095 328 Pfam MYB-CC type transfactor, LHEQLE motif 135 181 IPR025756 -
Viun6g02095 328 FunFam Myb family transcription factor 48 106 - -
Viun6g02095 328 MobiDBLite consensus disorder prediction 24 46 - -
Viun6g02095 328 MobiDBLite consensus disorder prediction 200 276 - -
Viun6g02095 328 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Viun6g02095 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 318 IPR044848 GO:0003700
Viun6g02095 328 Coils Coil 138 158 - -
Viun6g02095 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 106 IPR017930 -
Viun6g02095 328 MobiDBLite consensus disorder prediction 109 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02095 Viun-Chr6 27172330 27176481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02095 84 328 G2-like Transcription Factor Family AT2G01060 63.241 1.24e-90 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun6g02095 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02095 - - gmx:100786925 566.229