Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02083 ATGGCTTCGGAGATTGAAATTTCTCCGGCCGACGCTCGCAAGGCTCCCGGCAAGGAGCAGCAAGCGGCCGGCGTCGGAATCCTTCTGCAGATCATGATGCTCGTCCTGTCTTTCGTCCTCGGCCACGTTCTCCGTCGCAAGAAGGTTTACATCATCCCCGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGCATTCTAGCAAACATTTCGAACACCGAGACTAGTATCAGGGCGTGGTTCAATTTTCACGAGGAGTTTTTCTTCCTGTTCCTGCTACCTCCTATCATATTTCAGTCCGGGTTCAGTCTCGCACCTAAACCCTTTTTCTCGAATTTTGGAGCAATAGTCACATTTGCTATATTCGGCACCTTTATAGCTTCAATTGTTACGGGTATCTTGGTTTATCTTGGTGGTTTGCTCTTTCTAATGTATAGGCTACCTCTCGTAGAGTGCCTGATGTTTGGTGCTCTTATATCAGCTACCGATCCTGTAACTGTTTTGTCCATATTCCAGGAGCTGGGCACTGATGTCAATCTATATGCCTTGGTTTTTGGGGAATCCGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACCATGTCATCTGTTAAAGCTCATCCATCTGGACAAAATTTATTCATGGTGGTTGTTCGGTTTTTGGAGACTTTTGTAGGGTCAATGTCAGCAGGTGTCGGTGTTGGATTTATATCTGCTTTGCTATTTAAGTATGCAGGATTAGATATTGACAACCTTCAAAACTTGGAAAGCTGTCTATTTGTCCTTTTCCCATATTTCTCGTACATGCTTGCTGAAGGCCTTGGTCTCTCTGGTATTGTTTCAATACTGTTCACTGGAATAGTCATGAAGCATTATACGTATTCCAATTTGTCACAAAGTTCTCAAAGATTTGCTTCAGCCTTTTTCGAGTTGATATCATCTTTAGCTGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTTATCGGAATTGCAAGGGCTGCAAATGTCTTTTCTTGTGCTTATTTGGTCAATCTGGTTAGACCCAGTCATCGAAAGATACCTCCAAAACATCAGAGGGCGCTTTGGTACAGTGGACTTCGAGGAGCAATGGCTTTTGCGCTTGCTCTGCAATCCGTTCATGATCTTCCAGAAGGACATGGACAGACCATCTTTACTGCAACTACTGCTATAGTTGTCTTGACGGTATTGCTAATTGGTGGTTCGACGGGTACCATGCTGGAAGCTCTAGATGTTGTAGGTGGTGATGATGATAGCCCTTTGTCTTCTTCAATTGGTACTATCACAAATTTTGATGGAAACAACGGTTATATTGCTCCTCCTTACAATGAAGAGTCATCTTCAGGGAACAAAATCAAGATGAAGCTAAAAGAATTCCACAAGAGTGCTGCATCCTTTACAGCATTTGATAAAAACTACCTGACCCCATTCTTTACAACTCAAAATGGAGATGAAGATGATGAAGCCGAGCCTTTTACTTCTACAAGATCGGGATTTCATGGGCAGAACCGCTATTAG 1602 0.4251 MASEIEISPADARKAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKVYIIPEASASLLIGLIVGILANISNTETSIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFIASIVTGILVYLGGLLFLMYRLPLVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSSVKAHPSGQNLFMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYTYSNLSQSSQRFASAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPSHRKIPPKHQRALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDDDSPLSSSIGTITNFDGNNGYIAPPYNEESSSGNKIKMKLKEFHKSAASFTAFDKNYLTPFFTTQNGDEDDEAEPFTSTRSGFHGQNRY 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02083 533 Gene3D - 150 202 - -
Viun6g02083 533 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun6g02083 533 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun6g02083 533 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun6g02083 533 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun6g02083 533 MobiDBLite consensus disorder prediction 508 533 - -
Viun6g02083 533 Pfam Sodium/hydrogen exchanger family 33 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun6g02083 533 PANTHER SODIUM/HYDROGEN EXCHANGER 11 521 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Viun6g02083 533 NCBIfam sodium/hydrogen exchanger 3 31 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02083 Viun-Chr6 27101499 27109986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02083 19 506 Antiporters AT3G05030 31.931 6.58e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02083 K14724 - gmx:100790830 946.421