Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02067 ATGGGTGAAAGAGCTTTAGTATTCCTACTACTATTTTTCACTCATTCGTTGATTGTACTAGCGAATACAGCAAATTCGGATTACACTGCTCTGCTGACTCTAATGAGTGAATGGGAGAACACTCCACCTAATTGGGTGGGTTCAAATCCTTGCGGTGGTTGGGATGGCATTGAGTGTACAAATTCACGCATTACCTCCATATCATTAGCAAGCATGGCTTTGTCTGGTCAGCTTACTTCAGATATTGGATTACTCTCTGAACTCGTGATCTTGGATCTGTCTTACAATAAGAATTTAACTGGACCACTTCCCGATAACATTGGAAACTTGAGAAAGCTGAGAAACTTACTTCTTATTAACTGTGGTTTCACTGGTCCTATCCCAGCTACAATTGGAAATCTAGAACGGCTTGTCTTCCTATCTTTAAATTCCAATGGATTCACTGGTCCAATTCCAGCTGCCATTGGAAATCTCTCAAATGTGTATTGGCTAGACTTAGCTGAAAACCAGCTTGAAGGGCCCATCCCCATATCCAATGGAACTACTCCTGGTCTTGACATGATGTACAACACAAAGCATTTTCATTTTGGGGTGAATAAGCTTTCAGGAAACATACCTGCTCAACTTTTTAGCTCAAAAATGTCTCTCATTCATGTGCTTTTTGAAACCAACCGATTTACTGGAAGCATTCCATCTACACTTGGCCTTGTCAAGTCTCTGGAGGTGGTCCGTTTTGATAACAACTTTTTAAGTGGATCTTTGCCTGAGAACATCAACAATCTTACAAGTGTTAGGGAACTGTTCCTGTCCAACAATCGCCTGTCTGGTTCCCTCCCAAACCTTACCGGAATGAATTCCCTCAGTTACCTAGATGTGAGCAATAACAGTTTTGATCCATCAAACATTCCATCGTGGTTGTCGACTCTTCCAGCTTTGACGACAATAATGATGGAGGGTACAAAACTTCAAGGAACTATTCCTGTTTCTTTGTTCAACCTGCAACAGTTGCAGACAGTGGTGATGAAAAACAACCAGCTAAATGGCACTTTAGATATTGGCTCATCCATCAGCGACCAACTGGACCTCCTCGATTTGCAGTTTAATTATATTGAAGAGTTTAAACCACAAATCGACGTTTCTAAAGTGAACATAATACTTTTGAATAATCCAATTTGCCAAGAGACGGGAGTTCCACAGAGTTATTGTTCCATAACAACATCTAACAACAACTCATATTCAACGCCACCACAAAACTGTGTACCTGTTCCCTGCAGCTTAGATCAGACATTAAGCCCCAAATGCAAATGTGCATACCCATATACAGGAACCTTAAATCTCAGAGCTCCTTCCTTCTCAGATTTGGGAAACGAGACTGTCTATGTAACCCTGCAGTTAAGTCTGATGCAGTCTTTTCAACTTAATGATATACCTGTTGATTCAGTTTCTTTAAGCAATCCAAGGAAGAACACGTATCAGTACCTTGAATTGACTTTAAAAGTATTTCCATCTGGCCAAGATCGTTTCAATCGAACTGGAATCTCCAGTGTAGGCTTTATTCTCAGCAACCAAACATACAAGCCTCCTTCAATGTTTGGACCATATTATTTTACTTCTGATGACTATGAAAACTTTATGAATGAAACAGTACTACAAGGTCCTGGGACAACATCTAGTAAATCTTCAAATACTGGCATCATAGCTGGAGCTGCAGCTGGTGGTGCTGCCCTGTTGGTTTTAGTACTTGTTCTATTTGTGTATGCTCTCCACAGGAAGAATAAGCCAGTAAAAGCAACTGGGAAAAACAATCCTTTTGAACAATGGGATCCGGATGAGAGCAGTAGTAGCTTCCCACAGTTGAAAGGAGCAAGGCGCTTCAGTTTTGAAGAGATACAGAACTGCACCAAAAACTTCTCACAAGTCAATAATATAGGATCTGGCGGTTATGGGAAGGTTTATCGGGGAACTCTTCCCAACGGTCAACTAATTGCAGTCAAGCGAGCTCAGAAGGAATCTATGCAGGGAGGGTTGGAGTTTAAAACCGAGATTGAACTTCTATCAAGGGTCCACCATAAAAATCTTGTTAGCCTTATTGGTTTCTGCTTCGAGCAAGGAGAACAAATGCTGATTTATGAGTACGTTGCAAATGGTACTTTGAAGGACACCCTTTCAGGGAAATCTGGAATCAGATTAGACTGGATTAGAAGGCTGAAAATAGCCCTTGGTGCTGCCAGGGGTCTGGACTATCTGCATGAACTTGCCAATCCTCCAATCATACATAGGGACATCAAATCCACTAACATCTTACTGGATGAACGCTTGAATGCAAAAGTATCTGATTTTGGTCTCTCCAAACCTTTAGGTGATGGTGCAAAAGGTTATATCACCACACAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTACAGCTTCGGAGTACTAATGTTGGAGCTGATAACTGCAAGAAGGCCAATAGAGCGAGGGAAGTACATTGTAAAAGTGGTGAAGGGTGCTATAGACAAGACAAAAGGCTTCTGTGGTCTTGAGGAAGTTCTTGATCCTACAATTGAATTGGGGACAGCACTGAATGGTTTTGAGAAGTTTGTGGATCTCGCCTTGCAGTGTGTTGAAGAGTCAAGTTCTGACAGGCCCTCAATGAATTATGTGGTGAAAGAAATTGAGAACATGGTGCAGTTGGCTGGTTCAAGCCCCATTTTATCAGTATCAGGGTCCACTTCATCTAGTTACAACAATCCAACCAAGGGAAGTTCCCTCCATCCTTACGACAATGAATACTTTGATTCAAGTGTGATTCTTCCACGTCCATAA 2868 0.4142 MGERALVFLLLFFTHSLIVLANTANSDYTALLTLMSEWENTPPNWVGSNPCGGWDGIECTNSRITSISLASMALSGQLTSDIGLLSELVILDLSYNKNLTGPLPDNIGNLRKLRNLLLINCGFTGPIPATIGNLERLVFLSLNSNGFTGPIPAAIGNLSNVYWLDLAENQLEGPIPISNGTTPGLDMMYNTKHFHFGVNKLSGNIPAQLFSSKMSLIHVLFETNRFTGSIPSTLGLVKSLEVVRFDNNFLSGSLPENINNLTSVRELFLSNNRLSGSLPNLTGMNSLSYLDVSNNSFDPSNIPSWLSTLPALTTIMMEGTKLQGTIPVSLFNLQQLQTVVMKNNQLNGTLDIGSSISDQLDLLDLQFNYIEEFKPQIDVSKVNIILLNNPICQETGVPQSYCSITTSNNNSYSTPPQNCVPVPCSLDQTLSPKCKCAYPYTGTLNLRAPSFSDLGNETVYVTLQLSLMQSFQLNDIPVDSVSLSNPRKNTYQYLELTLKVFPSGQDRFNRTGISSVGFILSNQTYKPPSMFGPYYFTSDDYENFMNETVLQGPGTTSSKSSNTGIIAGAAAGGAALLVLVLVLFVYALHRKNKPVKATGKNNPFEQWDPDESSSSFPQLKGARRFSFEEIQNCTKNFSQVNNIGSGGYGKVYRGTLPNGQLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLIGFCFEQGEQMLIYEYVANGTLKDTLSGKSGIRLDWIRRLKIALGAARGLDYLHELANPPIIHRDIKSTNILLDERLNAKVSDFGLSKPLGDGAKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGKYIVKVVKGAIDKTKGFCGLEEVLDPTIELGTALNGFEKFVDLALQCVEESSSDRPSMNYVVKEIENMVQLAGSSPILSVSGSTSSSYNNPTKGSSLHPYDNEYFDSSVILPRP 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02067 955 SUPERFAMILY L domain-like 58 396 - -
Viun6g02067 955 SMART serkin_6 637 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02067 955 Gene3D Transferase(Phosphotransferase) domain 1 713 916 - -
Viun6g02067 955 Gene3D Ribonuclease Inhibitor 281 403 IPR032675 -
Viun6g02067 955 FunFam Leucine-rich repeat protein kinase family protein 181 280 - -
Viun6g02067 955 FunFam Leucine-rich repeat protein kinase family protein 602 712 - -
Viun6g02067 955 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Viun6g02067 955 Gene3D Ribonuclease Inhibitor 182 280 IPR032675 -
Viun6g02067 955 ProSiteProfiles Protein kinase domain profile. 637 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02067 955 FunFam Leucine-rich repeat family protein 26 180 - -
Viun6g02067 955 Pfam Protein tyrosine and serine/threonine kinase 640 905 IPR001245 GO:0004672|GO:0006468
Viun6g02067 955 ProSitePatterns Protein kinases ATP-binding region signature. 643 665 IPR017441 GO:0005524
Viun6g02067 955 SUPERFAMILY Protein kinase-like (PK-like) 623 930 IPR011009 -
Viun6g02067 955 Gene3D Phosphorylase Kinase; domain 1 608 712 - -
Viun6g02067 955 CDD STKc_IRAK 643 909 - -
Viun6g02067 955 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 713 921 - -
Viun6g02067 955 PANTHER RECEPTOR-LIKE PROTEIN 55 36 910 - -
Viun6g02067 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 757 769 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02067 Viun-Chr6 27033220 27040353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02067 5 953 Receptor kinase-like Gene Family AT5G49760 57.817 0.0 1028
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Viun6g02067 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02067 - - gmx:100780344 1572.37