Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02058 ATGGAAGAGACCTCTCTCTGCTGTGAACAAGTACCGGATGGGGAATGCATTGAGGTTCAGAAAGACGAAGATGGCGCGCTGATTGAATTGGATTGTCAGAATGGTTTTCCTGAGGGGAGAAAGGAATTTGTTGCACCTGCTGTTGGAATGGAGTTTGAGTCATACGATGATGCTTACAACTATTATATTTGTTATGCCAAGGAGGTGGGGTTTCGTGTACGGGTGAAGAATTCGTGGTTCAAGCGGAATAGCAGAGAGAAGTATGGTGCAGTGCTTTGCTGTAGCAGCCAGGGTTTCAAGAGAATAAAGGATGTTAATCATTTGAGGAAGGAGACGAGAACTGGTTGTCCTGCAATGATAAGGATGAGACTGGTGGAGTCACAGAGATGGCGGGTGCTTGAAGTTATGCTTGAACATAACCACATGTTGGGTGCTAAGATACAGAGGTTGGTTAAGAAGATGGGAACTGGGATGAAGAGGAAATCGTTGCCTAGTTCTGATACCGAGGGGCAGACGATTAAGTTATATCGTGCACTTGTGATTGACGCGGGAGGTGATGGAATTTCAAACACCACTGCGAGAGAGGACAGAAGTTTCTGTGAGTTTTCTAACAAGTTGAACCTTAGAAAAGGTGACTCACAGGCCATTTATAATTTCCTCTGCCGAATGCAATTGACTAATCCAAACTTCTTTTACTTGATGGATTTCAATGACGAAGGGCATTTGAGGAATGTATTTTGGGTTGATGCTAGGTCCAGGGCTGCGTGCGGTTATTTTGGCGATGTTATTTATTTTGACAACAGTTATTTGTCGAACAAATATGAAATCCAGCTGGTGACTTTTGTTGGAATAAACCACCATGGTCATTCGGTGTTATTAGGATGTGGCCTGCTTGCAAGTGAAACAACAGAGTCTTATGTATGGTTGTTTAGGACATGGATTAAATGTATGTCAGGATGTTCACCCCAAACTATTATCACTGACAGGTGCAAGGCTTTGCAGAGAGCAATTGCAGAAGTTTTTCCTAGATGTCGTCATTGTTTTGGCTTGTCATTAATTATGAAAAAGATACCAGAAAAATTGGGAGGTTTGCACAACTATGATGCACTCAGGAAAGCACTGATTAAAGCAGTTTATGAAACATTGAAAGTGATTGAGTTTGAAGCAGCATGGGGATTTATGATTCAACATTTTGGAGTTAGTGATCATGAGTGGCTTCGTTCTCTGTATGAAGATCGAGTTCATTGGGCTCCGGTATTTTTGAAGGACACATTTTTTGCTGGAATGTCTGCAGCTCGCCCTGGGGAGAACATTACTCCTTTTTTTGATAGATACGTGCACAAACAGACCCCACTGAAGGAGTTTCTTGATAAGTATGAATTAGCTCTTCACAAGAAGTACAAGGAAGAGTCTTTTGCAGATATTGAATCAAGGAGCTCAAGCCCCTTGCTGAAAACTAGATGTTCCTTTGAATTGCAGCTCTCCAGATTGTACACTAGAGAAATGTTCATGAAATTCCAGTTAGAAGTGGAAGAAGTATATTCTTGTTTTGGTACAACACAGTTACATGTGGATGGTTCCATCATAATTTTCTTGGTCAAGGAGCGTGTTTTGATTGAGGGAAACCGACGGGAGATTCGGGATTTTGAAGTTTTGTACAGTAGGACCGTAGGTGAAGTTCGTTGCATCTGTAGTTGCTTTAATTTTTATGGATATCTTTGTCGACATGCACTGTGTGTGCTCAATTTTAATGGGGTTGAAGAGATACCTCACAGATACATTCTTTCGCGATGGAAGAAAGATTACAAGCGTCTTTATGTTCCTGATCACAGCTCTGGTACCTCTGATGATACTGACCGCATTCAATGGTCTAATCAGTTATTTAGAAGTGCCTTGCAAGTTGTTGAGGAGGGTATACTTTCTCTAGATCATTACAATGTAGCGTTACAATCTTTAGAAGAATCACTGAGTAAGGTTCATGATGTAGAGCAGAGACAAGAGATAACAGAAGGAAGAACGCAGTTGGCAGTGAAGAAGAGAGAGCAGAGAAACAGCATTTCGTTCACTGCTACTCTCTCTTTTCTTCTCTTATCTTTTCTGTTACTAACTCATGTGAACTCTCTGGCTATGACTGACGATACCATGTGTTCTCCAAGCGACAAGGACTTGTCGCTTAGTCCTAATCTTGATATCACGATAGATGATGGCTCTCCGAACAGTGAGCAACTTCTTGACATAGTGGACGAGGGCAACGAGCTTGACAATGAATGTGGGCAATTGTTTGAGATTGATGGAAGTGGACGTGAAAATGGGAGGGATGAAACCACAGTAGTTGATAGTCACAGCGTAGAATCTCACGGGAAAGACTGCCCCCCACCAATTGTAGGAATGGAGTTTGATACTTATGATGATGCATACAACTATTACAATACCTATGCCAAGGAAATTGGATTTGCTACTCGAGTTAAATCTTCATGGACGAAACGTAACAGCAAAGAGAAGCGTGGTGCGGTTCTGTGCTGCAACTGTGAGGGTTTCAAAACAACCAAAGAAGCAAATAGTCACAGGAAAGAAACAAGAACGGGCTGTTTAGCAATGATTAGATTGAGATTAGTGGAATCTAACAGGTGGAGAGTCGATGAAGTCAAGCTTGAGCATAACCATTCATTTGATCCTGAAAGAGCACAAAACTCTAAATCACATAAGAGGATGGACAGTAGGGCAAAAAGAAAAGTTGAGCCAACTCTAGACGTTGAAGTAAGAACGATCAAGTTATATCGAATGCCTGTTGTAGATGCATCAGGTTATGGAAGCTCAAATTCCACTGAAGGTGCAACTAACAACCACATTAATTGTTCCAAGCGTTTGAAACTTAAAAAAGGTGATCCGGAGCTTATTTCAAATTACTTCTGCCGCATTCAATTGACTAATCCTAACTTTTTCTATGTGATGGATCTGAATGATGATGGACAACTGAGGAATGTATTTTGGATTGACTCTAGATCTAGGGCTGCTTATAGTTATTTTGGTGATGTGGTTGCATTTGACTCAACGTGTTTGTCAAACAATTATGAGATTCCTCTTGTTGCATTTGTTGGTGTTAATCACCATGGCAAATCTATTTTGCTAGGATGTGGTCTGCTTGCAGATGAGACATTTGAAACATATATTTGGTTATTTAGGGCATGGCTCACATGTATGACTGGTCGCCCTCCACAAACTATGATCACAAACCAGTGTAAGGCCTTGCAAAGTGCAATTGCTGAGGTTTTCCCGAGAGCTCACCATAGAATTTGTCTATCGCAAGTCATGCAGAGCATTCTTGGGTGTTTTGTGCAGTTTCAGGAGTACGAGGCATTTCAAATTGCGCTTACTAAAGTCATATATGACTCTAAAACAGTAGACGAGTTTGAAAGGGCTTGGGATGATCTAACCCAGCATTTTGGAATAAGAAATCACGAAAAGATCCTAACCTTGCATGAGGAACGAGAGCATTGGGCCCCAGTGTACTCCAAAGACACATTTTTTGCAGGAATATCTGATTATGAAAAGGGTGAGTCTGTGGTTCCCTTTTTCAAGGGTCATGTGCATCAACAAACTTCTTTGAAAGAATTTTTTGAGATTTATGAATTAGTTCAGCAGAAAAAACATAAAACCGAAGTTCTTGATGATCTTGAGTCATGCGATTTGAGCTCATTACTGAAGACAAGATGCTACTACGAGTTGCAAATCTCTAAATTGTACACAAATGCTGTATTTAGGAAGTTTCAAGATGAGGTAGTGATGATGCCCTCTTGTTTCAGCATCACGCAGACTCAAACTAGTGGCTCTATGGTGACGTACATGGTAAAAGAACGAGAAGTGGAAGACCCTGCAACAGATGGTAGTAGGCATTTTGAAGTCATGTATGATAAAGCTGGAACAGAAGTACGGTGCATTTGTAGTTGCTTTAATTTCAAGGGCTACCTGTGCAGACATGCCTTGTATATCCTTAATTACAATGGTGTGGAGGAAATTCCATGTCAATACATTTTGTCAAGATGGAGGAAAGATTTTAAGCGTTTGTATGTACCTCATCTTAGTGCTGATAATGTTGATATTAGCAACCCAGTTCAGTGTTTTGATCATTTGTACAAACGTGCCATGCGAGTTGTTGAAGAGGGGATGATATCCCAAGATCATTATATGGTTTCTTGGCAAGCATTTAAAGAATCTCTCAATAAGATTCGCCTTGTAGCAGACAAGATTGAATAA 4254 0.4079 MEETSLCCEQVPDGECIEVQKDEDGALIELDCQNGFPEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHLRKETRTGCPAMIRMRLVESQRWRVLEVMLEHNHMLGAKIQRLVKKMGTGMKRKSLPSSDTEGQTIKLYRALVIDAGGDGISNTTAREDRSFCEFSNKLNLRKGDSQAIYNFLCRMQLTNPNFFYLMDFNDEGHLRNVFWVDARSRAACGYFGDVIYFDNSYLSNKYEIQLVTFVGINHHGHSVLLGCGLLASETTESYVWLFRTWIKCMSGCSPQTIITDRCKALQRAIAEVFPRCRHCFGLSLIMKKIPEKLGGLHNYDALRKALIKAVYETLKVIEFEAAWGFMIQHFGVSDHEWLRSLYEDRVHWAPVFLKDTFFAGMSAARPGENITPFFDRYVHKQTPLKEFLDKYELALHKKYKEESFADIESRSSSPLLKTRCSFELQLSRLYTREMFMKFQLEVEEVYSCFGTTQLHVDGSIIIFLVKERVLIEGNRREIRDFEVLYSRTVGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPHRYILSRWKKDYKRLYVPDHSSGTSDDTDRIQWSNQLFRSALQVVEEGILSLDHYNVALQSLEESLSKVHDVEQRQEITEGRTQLAVKKREQRNSISFTATLSFLLLSFLLLTHVNSLAMTDDTMCSPSDKDLSLSPNLDITIDDGSPNSEQLLDIVDEGNELDNECGQLFEIDGSGRENGRDETTVVDSHSVESHGKDCPPPIVGMEFDTYDDAYNYYNTYAKEIGFATRVKSSWTKRNSKEKRGAVLCCNCEGFKTTKEANSHRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRMDSRAKRKVEPTLDVEVRTIKLYRMPVVDASGYGSSNSTEGATNNHINCSKRLKLKKGDPELISNYFCRIQLTNPNFFYVMDLNDDGQLRNVFWIDSRSRAAYSYFGDVVAFDSTCLSNNYEIPLVAFVGVNHHGKSILLGCGLLADETFETYIWLFRAWLTCMTGRPPQTMITNQCKALQSAIAEVFPRAHHRICLSQVMQSILGCFVQFQEYEAFQIALTKVIYDSKTVDEFERAWDDLTQHFGIRNHEKILTLHEEREHWAPVYSKDTFFAGISDYEKGESVVPFFKGHVHQQTSLKEFFEIYELVQQKKHKTEVLDDLESCDLSSLLKTRCYYELQISKLYTNAVFRKFQDEVVMMPSCFSITQTQTSGSMVTYMVKEREVEDPATDGSRHFEVMYDKAGTEVRCICSCFNFKGYLCRHALYILNYNGVEEIPCQYILSRWRKDFKRLYVPHLSADNVDISNPVQCFDHLYKRAMRVVEEGMISQDHYMVSWQAFKESLNKIRLVADKIE 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02058 1417 Pfam SWIM zinc finger 536 581 IPR007527 GO:0008270
Viun6g02058 1417 Pfam SWIM zinc finger 1312 1328 IPR007527 GO:0008270
Viun6g02058 1417 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 779 1410 IPR031052 GO:0006355
Viun6g02058 1417 Pfam FAR1 DNA-binding domain 807 891 IPR004330 -
Viun6g02058 1417 Pfam FAR1 DNA-binding domain 60 143 IPR004330 -
Viun6g02058 1417 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Viun6g02058 1417 ProSiteProfiles Zinc finger SWIM-type profile. 1299 1335 IPR007527 GO:0008270
Viun6g02058 1417 SMART 26again6 560 587 IPR006564 GO:0008270
Viun6g02058 1417 SMART 26again6 1310 1337 IPR006564 GO:0008270
Viun6g02058 1417 MobiDBLite consensus disorder prediction 888 911 - -
Viun6g02058 1417 Pfam MULE transposase domain 262 356 IPR018289 -
Viun6g02058 1417 Pfam MULE transposase domain 1012 1105 IPR018289 -
Viun6g02058 1417 MobiDBLite consensus disorder prediction 764 789 - -
Viun6g02058 1417 MobiDBLite consensus disorder prediction 766 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02058 Viun-Chr6 26982543 26992682 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun6g02058 MULE 1.8e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02058 K17604 - gmx:100796448 2595.46