Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02023 ATGCGTATATCAGTAGTAGCAGTGTTGTGTGCAGTAGTGATGCATGGAGTGTCATGTGGAGATTTGAGTTCTACTTACTACGACACAACATGCCCTAATCTATATTCCATTGTCTATGGAGTCATCAACAACGCTTACCTCTCTGATCCCCGCATTGCTGCCAACCTCCTCAGGCTTCATTTTCATGATTGCTTTGTTCAGGGTTGTGATGGATCAGTTTTGCTGAACAACACTGATACCATAGAAAGCGAGCAAGATGCAAGTCCAAATGTGAATTCATTAAGGGGTTTGGATGTTGTGAATAACATCAAGACTGCAGTGGAAGATAGTTGTCCAGAGACAGTTTCTTGTGCTGATATTCTTGCTATTGCAGCTGAAGTAGGTTCTGTTCTGGGAGGAGGTCCATCATGGTCAGTTCTATTAGGAAGAAGGGATAGCTTAACGGCAAACAGAACCCTTGCCGGTATAAACCTTCCCGCACCACACTTCACACTTTATCAACTTCAACAATCTTTTGCTGTCCAAGGTCTCAACACCACTGATTTAGTTTCACTCTCAGGTGCACATACGTTTGGACAAGCTCACTGCAACAATTTCATCAACAGGTTATACAATTTCAACTACACTGGAAATCCAGATCCAACTCTGAATACCACTTACTTGGAAGCACTGCGTGAGATATGCTCCGTAGGTTTGGATAACCTCGCCGATTTGGATCTGACCACACCTAAGCAATTCGATAACAAATACTACTCCAATCTTCAGTACCAGAATGGCCTGCTTCAGAGCGACCAAGAACTCTTCTCCACTTCCGATGCTGATACCGTTGCCCTTGTCAACAGATTCAGCACTGACCAAAGTGTTTTCTTCGACAACTTCGTAGTTTCAATGATAAAAATGGGTAATACTTCAGTGCTGACAGAAGATGAAGGAGAAATTCGGTTGCAGTGTAATTTTGTGAATGGAGACTCCTCTGGTTTAGTTGGTGTGGTATCCAAGGCTCAAAAACTGAAGCTCGCAGCAAAATCCAAATAA 1035 0.43 MRISVVAVLCAVVMHGVSCGDLSSTYYDTTCPNLYSIVYGVINNAYLSDPRIAANLLRLHFHDCFVQGCDGSVLLNNTDTIESEQDASPNVNSLRGLDVVNNIKTAVEDSCPETVSCADILAIAAEVGSVLGGGPSWSVLLGRRDSLTANRTLAGINLPAPHFTLYQLQQSFAVQGLNTTDLVSLSGAHTFGQAHCNNFINRLYNFNYTGNPDPTLNTTYLEALREICSVGLDNLADLDLTTPKQFDNKYYSNLQYQNGLLQSDQELFSTSDADTVALVNRFSTDQSVFFDNFVVSMIKMGNTSVLTEDEGEIRLQCNFVNGDSSGLVGVVSKAQKLKLAAKSK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02023 344 FunFam Peroxidase 159 300 - -
Viun6g02023 344 CDD secretory_peroxidase 22 320 IPR033905 GO:0004601|GO:0042744
Viun6g02023 344 PANTHER PEROXIDASE 72-RELATED 19 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Viun6g02023 344 SUPERFAMILY Heme-dependent peroxidases 22 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 Gene3D Peroxidase, domain 2 159 300 - -
Viun6g02023 344 ProSiteProfiles Plant heme peroxidase family profile. 21 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 Gene3D - 26 321 - -
Viun6g02023 344 FunFam Peroxidase 25 169 - -
Viun6g02023 344 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02023 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Viun6g02023 344 Pfam Peroxidase 41 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02023 Viun-Chr6 26721233 26723335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02023 3 325 Peroxidase AT5G06730 54.769 3.90e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02023 K00430 - vra:106774868 588.956