Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02020 ATGAGGGGTTTTCATGGTACAGTGACAGCTCTGTGTTGTGTAGTGGTTGTGCTCGGAGTGTTTCCACTCTCTCTAGATGCACAAGCACAACAACTTGATCCTTCGTTTTACAGAAACACATGTCCCAGGGTTCACTCCATTGTTCGTGAAGTCGTGAGAAACGTTTCGAAGAAGGATCCTCGCATGCTCGCCAGTCTCATTAGACTTCACTTTCATGACTGCTTTGTTCAAGGGTGTGATGCCTCGGTTTTACTGAACAACACTGCTACAATAGTGAGTGAGCAGCAAGCTCTGCCGAACAACAACTCACTAAGAGGTTTGGATGTTGTGAATGATATCAAGACAGCAGTGGAAAATGCTTGCCCCGGCGTGGTTTCTTGTGCAGACATTCTTACTCTTGCATCTGAAATTTCTTCAGTTCTGGGAGGTGGTCCTGACTGGAAAGTTCCGTTGGGAAGAAGAGATAGTTTAACAGCAAACCGAACACTTGCCAATGAAAACCTTCCAGCTCCTTTCTTCAACCTAACCCGACTCAAAGATGCATTTAGAAAACAAGGCCTTGACACTACTGATCTGGTTGCACTCTCAGGTGCTCATACATTTGGCAGAGCTCACTGTTCGTTCATTCTTGACCGATTGTACAACTTCAGTGGTACTGGGAGACCCGACCCAACTCTGGACACAACTTATTTGCAACAATTGCGGTCACAGTGCCCCCAAGGTGGACCGAACAACCTTGTAAATTTTGACCCGACAACTCCTGATACAATCGACAAGGCCTACTACTCTAATCTTGTGGTTAAAAAGGGTTTGCTTCAGAGTGATCAAGAGTTGTTCTCGACGCCCGGCGCTGATACCATTCCCATTGTCACCAGGTTCAATAGCGATCAAAAGGTTTTCTTTGACGCGTTTGAGGCTTCAATGATTAAGATGGGTAACATTGGTGTGCTCACTGGGAAGCAAGGAGAAATCAGAAAGCATTGTAATTTTGTTAACACGAAATCTGTCGAACTTGATACTGTGGTCTCTGGGGAATCTTCTGAAGACGGTTTGGTTAGCTCTTTCTAA 1068 0.4532 MRGFHGTVTALCCVVVVLGVFPLSLDAQAQQLDPSFYRNTCPRVHSIVREVVRNVSKKDPRMLASLIRLHFHDCFVQGCDASVLLNNTATIVSEQQALPNNNSLRGLDVVNDIKTAVENACPGVVSCADILTLASEISSVLGGGPDWKVPLGRRDSLTANRTLANENLPAPFFNLTRLKDAFRKQGLDTTDLVALSGAHTFGRAHCSFILDRLYNFSGTGRPDPTLDTTYLQQLRSQCPQGGPNNLVNFDPTTPDTIDKAYYSNLVVKKGLLQSDQELFSTPGADTIPIVTRFNSDQKVFFDAFEASMIKMGNIGVLTGKQGEIRKHCNFVNTKSVELDTVVSGESSEDGLVSSF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02020 355 Gene3D - 36 332 - -
Viun6g02020 355 ProSiteProfiles Plant heme peroxidase family profile. 31 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 Gene3D Peroxidase, domain 2 169 311 - -
Viun6g02020 355 PANTHER PEROXIDASE 72-RELATED 29 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 SUPERFAMILY Heme-dependent peroxidases 31 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 FunFam Peroxidase 35 184 - -
Viun6g02020 355 FunFam Peroxidase 169 311 - -
Viun6g02020 355 Pfam Peroxidase 48 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 CDD secretory_peroxidase 31 331 IPR033905 GO:0004601|GO:0042744
Viun6g02020 355 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02020 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02020 Viun-Chr6 26689891 26692249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02020 3 354 Peroxidase AT2G38380 54.802 3.06e-133 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02020 K00430 - gmx:547499 608.986