Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02019 ATGAATTCCCTTGGTCTCACTACTACTTTATGTTGTGTTCTGGTCGTGCTTGGAACACTACACTGCTTCTCGTGTGAACAACTAGATCCTTTGTTTTACAACACCACATGTCCAAATGTGTCTTCAATTGTAACAGATGTGCTCACAAATGTTTCCCAATCTGATCCTCGCATGCTTGCAAGTCTCATCAGACTCCACTTTCACGACTGTTTTGTTCAAGGGTGTGATGCATCGGTTCTTTTGAACGACACTGATACGATCGTGAGTGAACAAAGTGCAGCGCCAAATAACAACAGCTTAAGAGGTTTGGATGTTGTGAATCAAATCAAGACAGCAGTGGAAAATCATTGTCCTGGGGCTGTCTCCTGTGCTGATATTCTTGCCCTTGCAGCTGAGAGATCTTCTCATCTGGCTAAAGGTCCTTCTTGGGAAGTTCCATTAGGAAGAAGGGATAGTTTGACAGCAAATCGAACCCTTGCTAATCTAAACCTTCCTGGTCCTAATTTTACACTTGATCAACTTAATTCCTCATTTGCTAAGCAGAACCTCACTGTCACTGATTTAGTTGCACTTTCAGGTGCCCATACAATCGGTAAGGCTCAATGCAGATTTTTTGTGAATCGATTATACAATTTTAGCGGTGGGAACCCAGATCCTATTCTCAACACCACTCTCTTAGAATCATTGCGAGCAATATGTCCCAATGGTGGAGTTGGAACAAATCTCACCAATTTGGACTTAACTACTCCTGAAACATTCGATTCCAAGTACTATTCCAATCTTCAACTTCAAAATGGCCTGCTTCGGAGTGATCAAGAGCTGTTTAGCACGACTGATGCAGACACTGTTCCTATTGTCAACAGCTACATTAACAATGAAACTCTTTTCTTTGAAGATTTCATAGCGTCGATGATAAAAATGGCCAACATTGGAGTGTTGACAGGATCAGAGGGAGAAATTCGAACGCAGTGCAATTTTGTGAATACAAATTCTTCTGCATTTGATATCTTTACCATCCAACAATCAAAAGAAGAAATGGTTAGCTCAATCTAA 1053 0.4103 MNSLGLTTTLCCVLVVLGTLHCFSCEQLDPLFYNTTCPNVSSIVTDVLTNVSQSDPRMLASLIRLHFHDCFVQGCDASVLLNDTDTIVSEQSAAPNNNSLRGLDVVNQIKTAVENHCPGAVSCADILALAAERSSHLAKGPSWEVPLGRRDSLTANRTLANLNLPGPNFTLDQLNSSFAKQNLTVTDLVALSGAHTIGKAQCRFFVNRLYNFSGGNPDPILNTTLLESLRAICPNGGVGTNLTNLDLTTPETFDSKYYSNLQLQNGLLRSDQELFSTTDADTVPIVNSYINNETLFFEDFIASMIKMANIGVLTGSEGEIRTQCNFVNTNSSAFDIFTIQQSKEEMVSSI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02019 350 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 FunFam Peroxidase 165 307 - -
Viun6g02019 350 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Viun6g02019 350 Gene3D - 32 328 - -
Viun6g02019 350 Pfam Peroxidase 47 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 Gene3D Peroxidase, domain 2 165 307 - -
Viun6g02019 350 ProSiteProfiles Plant heme peroxidase family profile. 27 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Viun6g02019 350 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 PANTHER PEROXIDASE 72-RELATED 25 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g02019 350 FunFam Peroxidase 31 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02019 Viun-Chr6 26672496 26674111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02019 13 348 Peroxidase AT5G06730 57.270 5.40e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02019 K00430 - gmx:100814455 512.686