Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01995 ATGGCTAACTATTCTCATCCTCATATCTGCCAATGTCTGAGCCGCTTGCTTGGCTTCCGGCGACATTTTCCGGTCACTGTCGCCGGAAACCGCCGCAAAACTGGTCAACAGTTGGTTGAGGAAGTGTTGTCTCTGGCCCAAGGCCTACTCCACCTTGGACTCGCACCTGGTCACGTGGTTGCCATTTCTGCTTACAATAGTGATAGGTATCTGGAATGGCTATTAGCCATTGCATTTGTTGGAGGAATAGCTGCTCCTCTGAACTATAGATGGAGTTTTGAAGAGGCAAGATTAGCATTGGCTGCAGTGAAGCCAGTGTTGCTAGTGACTGACGAGAGCAGTTCCACATGGTACTCAAAACTTCAGCAAAATGATATTCCATCTCTGAAGTGGCATATTTTGTTGGATTCCGCTTCCTTAGATTTTACTAAGTGGAACGTGTTCACTCCAGAAATGATTAAGAGGTATCCTGCAAAGCTTGAACCATTTGACTACTCATGGGCACCTGAAGGCACTGTCATAATATGCTTTACTTCAGGAACGACGGGAAAGCCTAAGGGAGTCACTCTAAGTCATGGAGCTTTGATCATACAATCCTTAGCGAAGATTGCCATAGTTGGCTACAATGAGGATGATGTCTATCTGCATACTGCTCCGTTATGCCATATTGGTGGCTTGTCATCAGCCATGACCATGCTTATGGTTGGAGGTTGTCATGTCTTGATGCCAAAGTTTGATGCAGAATCAGCTGTTGGTGCCATAGAACAATATGCAGTGACATCTTTTATCACAGTTCCTGCAATAATGGCCAGTCTGATTTCTGTAATTAGGCCCAAAGATATTTGGAAAGGAGGAGAAACTGTCAAGAAAATACTAAATGGGGGTGGAAGCCTCTCACATGAGCTCATCAAGGACACAAGCATATTCTTTCACAGAGCTAAACTTATTTCAGCTTATGGAATGACAGAAACCTGCTCTTCATTGACATTCCTGATGCTGTATGATCCAATGGATGAAAAGACAAACATGTCCCTTCAATCATTTGGTGTGGCAGGATCCAAGTTTATTCAGCAGCCACAAGGTGTCTGTGTTGGCAAGCCTGCACCCCATGTAGAACTGAAGATAAGTGCAGATGCTTCTGGTCAGATTGGAAGAATTCTAACTAGAGGACCACACATAATGCTTAGGTATTGGGAAACTCACACAAATCCATTAAGCCCGAACAATGAAGCCTGGCTTGACACAGGTGATATTGGATCGATTGATCATTATGGTAATCTGTGGCTTCTTGGTCGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAGGCAATTCTACTACAGCATCCAGGGATTACAAGTGTTGTTGTTGTGGGAATCCCAGATGCTCACCTAACAGAGATGGTAGCAGCATGTATCCAACTTAGAGAAAATTGGCAATGGTCAGAGCAATTGATTGTTTCAAATGAAGAGTTTAAGCTATCTAGAAAGAATCTCCAGCTACATTGTATAGAAAATCATTTAAGCAGGTTTAAGATACCAAAAATGTTTATTGCATGGAAAAAGCCATTTCCACTTACTACAACAGGGAAAATAAGAAGAAATGAAGTCAGAAAGGAAGTTATCTCTCAGCTACAATCTTTACATAGTAATCTTTGA 1680 0.4268 MANYSHPHICQCLSRLLGFRRHFPVTVAGNRRKTGQQLVEEVLSLAQGLLHLGLAPGHVVAISAYNSDRYLEWLLAIAFVGGIAAPLNYRWSFEEARLALAAVKPVLLVTDESSSTWYSKLQQNDIPSLKWHILLDSASLDFTKWNVFTPEMIKRYPAKLEPFDYSWAPEGTVIICFTSGTTGKPKGVTLSHGALIIQSLAKIAIVGYNEDDVYLHTAPLCHIGGLSSAMTMLMVGGCHVLMPKFDAESAVGAIEQYAVTSFITVPAIMASLISVIRPKDIWKGGETVKKILNGGGSLSHELIKDTSIFFHRAKLISAYGMTETCSSLTFLMLYDPMDEKTNMSLQSFGVAGSKFIQQPQGVCVGKPAPHVELKISADASGQIGRILTRGPHIMLRYWETHTNPLSPNNEAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILLQHPGITSVVVVGIPDAHLTEMVAACIQLRENWQWSEQLIVSNEEFKLSRKNLQLHCIENHLSRFKIPKMFIAWKKPFPLTTTGKIRRNEVRKEVISQLQSLHSNL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01995 559 CDD AFD_class_I 175 540 - -
Viun6g01995 559 Gene3D - 435 551 IPR045851 -
Viun6g01995 559 Gene3D - 9 432 IPR042099 -
Viun6g01995 559 PANTHER ACYL-COA SYNTHETASE 27 549 - -
Viun6g01995 559 Pfam AMP-binding enzyme C-terminal domain 448 538 IPR025110 -
Viun6g01995 559 ProSitePatterns Putative AMP-binding domain signature. 175 186 IPR020845 -
Viun6g01995 559 Pfam AMP-binding enzyme 26 439 IPR000873 -
Viun6g01995 559 SUPERFAMILY Acetyl-CoA synthetase-like 8 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01995 Viun-Chr6 26540675 26547391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01995 42 554 Monolignol Biosynthesis Gene Families AT4G19010 26.952 7.11e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01995 K14760 - gmx:100809925 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01995 6 26540675 26547391 Viun6g01995 6 26540675 26547391 ECH