Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01935 ATGATGATGGTGATGGAGATGGGATCCATGTGGTTGATCCTTGTGGTTGTAGCCATTGGTGGTGCTCTTTTAGTCCTCAAGAAGTTAAATTGGTGGCTCTATGAATCCAAATTAGGTGTGAAGCAGTACTCTCTACCCCCTGGTGACATGGGTTGGCCCCTCATTGGCAACATGTGGTCCTTCCTCAGAGCTTTCAAGTCCAAGGACCCTGATTCCTTCATCTCCTCCTTTGTTTCCAGATTTGGACGAACTGGAATGTACAAGACCTTGATGTTTGGAAACCCAAGTATAATTGTGACAACACCTGAAGCATGTAAAAGGGTGTTGACAGATGATGATAAATTCACTACTGGTTGGCCTCGTTCTGCAATAGAGCTCATTGGAAAGAGGTCATTTATTTCAATGGCTTTTGAAGAACACAAGCGCCTCAGGCGTTTGACATCCTCTTCAATCAATGGCATGGAAGCTTTGTCCCTTTACTTGACATATATTGAGAAAAATGTGAGAAGTTCATTGGAGACATGGGCCAAGCTTGGACAAATTGAGTTTTTAACTGAGATCAGGAAGCTTACTTTCAAAATCATAATGCATATTTTCCTTAGCTCAGAAAGTGAACCTATTATGGAGGCTCTGGAGAGGGAATACACAGCGCTTAATTATGGAGTCAGAGCCATGCGGATTAATATTCCTGGATTTGCATACCACAAGGCATTCAAGGCAAGGAAAAATCTAGTGGCCATATTTCAATCTATTGTGGACGAGAGAAGAAGCATAAGGAAGGGATATTTGCCTGGAAAAGCCAAAGATATGATGGATGCTCTGATAGATGTTGCTGATGAGGATGGAAGAAAGTTGGGTGATGAAGACATCATAGATATCATGTTAATGTACTTGAATGCAGGCCACGAATCTTCAGGACACATTACCATGTGGGCAACCTTCTTCCTGCAAAAGCACCCAGAATATCTCCAGAAAGCCAAGGCAGAACAAGAAGAAATAGTTCGGAGAAGGCCTCCAACACAGAAAGGGTTGACACTAAAGGATGTTCGGGAGATGGATTTTCTTTACAAGGTGATTGATGAAACAATGCGTGTGATTACTTTCTCACTAGTGGTCTTTCGGGAGGCGAAATCTGATGTCAATATCAATGGGTACTTAATTCCAAAAGGTTGGAAAGCACTTGTGTGGTTCAGATCAGTTCACCTTGATCCTGAAATATATCCTAATCCAAAGGAGTTTAACCCTTATAGATGGAATAAAGAACACAAAGCAGGAGAATTCCTTCCCTTTGGAGCAGGAAGCAGATTGTGTCCTGGGAATGATCTTGCCAAGATGGAAATAGCAGTTTTTCTTCATCATTTCCTTCTGAATTACCGGTTTGAACAGAAAAATCCTAATTGTCCTGTGAGATACTTACCACATACAAGGCCCATGGACAATTGCTTGGGAAGGGTGAGGAAATGTTGA 1467 0.4199 MMMVMEMGSMWLILVVVAIGGALLVLKKLNWWLYESKLGVKQYSLPPGDMGWPLIGNMWSFLRAFKSKDPDSFISSFVSRFGRTGMYKTLMFGNPSIIVTTPEACKRVLTDDDKFTTGWPRSAIELIGKRSFISMAFEEHKRLRRLTSSSINGMEALSLYLTYIEKNVRSSLETWAKLGQIEFLTEIRKLTFKIIMHIFLSSESEPIMEALEREYTALNYGVRAMRINIPGFAYHKAFKARKNLVAIFQSIVDERRSIRKGYLPGKAKDMMDALIDVADEDGRKLGDEDIIDIMLMYLNAGHESSGHITMWATFFLQKHPEYLQKAKAEQEEIVRRRPPTQKGLTLKDVREMDFLYKVIDETMRVITFSLVVFREAKSDVNINGYLIPKGWKALVWFRSVHLDPEIYPNPKEFNPYRWNKEHKAGEFLPFGAGSRLCPGNDLAKMEIAVFLHHFLLNYRFEQKNPNCPVRYLPHTRPMDNCLGRVRKC 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01935 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Viun6g01935 488 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01935 488 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01935 488 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01935 488 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01935 488 Pfam Cytochrome P450 46 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01935 488 Gene3D Cytochrome P450 35 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01935 488 PANTHER CYTOCHROME P450 26 42 474 - -
Viun6g01935 488 CDD CYP90-like 78 485 - -
Viun6g01935 488 FunFam Ent-kaurenoic acid oxidase 36 488 - -
Viun6g01935 488 SUPERFAMILY Cytochrome P450 41 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01935 488 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01935 488 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01935 488 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01935 488 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01935 Viun-Chr6 26156058 26161381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01935 10 488 Cytochrome P450 AT2G32440 65.625 0.0 685