Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01929 ATGTGCAGCTGCATCTTTGGGCCAATAATCATGGACAATTACCAAGGTGATTTAACTGACATACTCCGAGCCAGTGGTGGAGCATATGGTGGTAGCAGCAGTAGCAGCTGCAGCACAGGCACTTCATCTTCTGCTGAATTACCTACCACATCTCATCACCATACTATTACTCACACCCTCTCTCGTAATGATCACTGGCACCAACACTTCTCTTCTTCTTCTTCTTCTTCTGATCCCATCACCTTCTCTTCTGTGCTTCAAGACCCCAGAGGACTCACCAACTTCGGTGATCCCTTCTCCACCATGAGAGATCCCTTCCTTCAGGAGCTTGACATGCCTTCCGCTTCTGCCTACTTCACCGGGGGCTTGGAAGATGCAGCTGCCAGTTTTGGTGCTTCTGCTGTTAGTACTAATACTAATCCTAATCCTAATCCTAATGCTAGTACCGGTGTTTTTGCTGCACACAAGATTCTTGAGGAGCATGACATGAGAAGACCTTGTAAAAACATATTCTCCAACATGATTCAGATCTCTCCCAATGCAAAGTTACCGGTCTCACCCTATGATTCCACCGCGGCCGTGGCACCTTCTCCAAGGGCAATTAAACCTCCTGCTGTTGTTTCACCCAACATGGTTAATGCAAACTCCTCCAAGGATTGCCTTGTGGACACCACAGGAGTGCAGATCTCATCTCCACGGAATCCGGGTCTTAAACGAAGAAAGAACCAGGCCAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAGGTTGTTCCGTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATCAAAGGTTCACCTTATCCCAGGGGTTACTACAGATGCAGCAGCTCAAAGGGTTGTTCTGCGAGGAAGCAAGTTGAGCGGAGCAGAACAGACCCAAACATGTTGGTTATTACATACACATCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTGGCTGGTTCGACCAGGTCACAGCCATCGAAGAACAATGCTGGAAATTCAAAGAGCTCAGAAGGGTCAAACCCCCAAAAGAGCACAACATCAAAAGCAAAGGATGAGCAGCAGCAGCAGCAGCAGCAGGAGAGTAACAACAGTGAGGGCAATGCCTCACCGGTTGTTGGTGGGAACTCATCAGCGAACAGTGCATGTGTGAAGGAAGAGAACATGGAGGACATAGAGAAGCAGTTTGAGATGGATGAGGGAGAGTTCAGTGATGGACTCCCTTACAAGCCTTGCTTGATGGATCAGAGTAATAATCAATCTGAGGACTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCACTGGATATTCTGTTTAGCCAAGGTTTTGGTGCAGGTGATGATGATCAAAGGGAAGAATCCAAGGCCTTGGATCCATTCCATCTGTTTGACTGGTCAGGAGACAACAACACCAGCACAAACAGCAGTTCATTTGAAGAGCCTAATGCAAAGAGAAGGTTATGA 1512 0.4742 MCSCIFGPIIMDNYQGDLTDILRASGGAYGGSSSSSCSTGTSSSAELPTTSHHHTITHTLSRNDHWHQHFSSSSSSSDPITFSSVLQDPRGLTNFGDPFSTMRDPFLQELDMPSASAYFTGGLEDAAASFGASAVSTNTNPNPNPNASTGVFAAHKILEEHDMRRPCKNIFSNMIQISPNAKLPVSPYDSTAAVAPSPRAIKPPAVVSPNMVNANSSKDCLVDTTGVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNAGNSKSSEGSNPQKSTTSKAKDEQQQQQQQESNNSEGNASPVVGGNSSANSACVKEENMEDIEKQFEMDEGEFSDGLPYKPCLMDQSNNQSEDFFAELGEIEADPLDILFSQGFGAGDDDQREESKALDPFHLFDWSGDNNTSTNSSSFEEPNAKRRL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01929 503 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 453 IPR044810 GO:0003700
Viun6g01929 503 MobiDBLite consensus disorder prediction 457 503 - -
Viun6g01929 503 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g01929 503 FunFam probable WRKY transcription factor 14 240 320 - -
Viun6g01929 503 SUPERFAMILY WRKY DNA-binding domain 264 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun6g01929 503 MobiDBLite consensus disorder prediction 283 394 - -
Viun6g01929 503 MobiDBLite consensus disorder prediction 310 394 - -
Viun6g01929 503 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g01929 503 MobiDBLite consensus disorder prediction 481 496 - -
Viun6g01929 503 Gene3D WRKY domain 240 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun6g01929 503 Pfam WRKY DNA -binding domain 268 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01929 Viun-Chr6 26084031 26087926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01929 1 467 WRKY Transcription Factor Family AT2G34830 43.064 2.72e-95 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun6g01929 WRKY 2.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01929 - - aprc:113852911 766.148