Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01914 ATGAGCATGGAAGCTGATGCTACCACCACCAATTCACAGTTACCACTAGCCGACACAGACATCAACTGGGACAGGTTGGACAAAACCAGGTTCCACGTCATCGGTGCCGTTCTCTTCACGGCTCAATCAGGCCTGCTTCATCCAACGGCGGTGGTGAAGACACGAATGCAAGTGGCGGGGTCGGAATCCTGGCACGTGCGAGGAGGAACGTCGGTGCTGGCCCAAATTCTGCGGAGCGATGGCGTTTCGGGAATCTTCAGAGGCTTCGGCACTTCCGCCATTGGTTCAATCCCCGGTAGGGTTCTGGCGCTCACCTCCCTCGAGGTCTCCAAAGACATTATCCTGAAACACACGCAAGCCACTCACATTCCAGAAGCTTCTCGTGTTGGCCTCGCTAACGCACTCGCTGGCATGATCTCTAACTTGGTTTCTTGCGTCTACTTCGTGCCATTGGATGTGATTTGTCAGAGGTTGATGGTGCAGGGTCTTCCTGGGACAACGTTTTGTAGAGGGCCGTTTGATGTTGTTCGGAAAGTTGTGGAGACTGAAGGGTTTCGTGGCTTGTATAGGGGTTTTGGATTAACGGCGATTACGCAGTCCCCTGCTTCTGCACTTTGGTGGGGTTCATATGCTGCCGCACAACACCTAATTTGGAGAAGTTTGGGCTACAAAGATGATACGGGTGAAAAACCTTCACATGTGGAAATGGTTACAGTTCAGGCTAGTGCTGGGATGGTGGCTGGTGCTTGTTCATCTGTTATCACCACTCCCATAGATACTGTGAAAACACGTCTTCAGGTGATGGACAACTATGGTTCTGAAAGACCATCAGTACTGAAGACAGCAAAGATTCTCCTTAAGGAAGATGGATGGTGGGGATTTTACAGGGGTTTTGGACCAAGATTTTTGAACATGTCACTTTATGGAACAACTATGATTGTTACTTATGAACTGATAAAGAGATTATCGGTTCAATCAAGTTTGAGGTCTTTTACGTAG 999 0.4915 MSMEADATTTNSQLPLADTDINWDRLDKTRFHVIGAVLFTAQSGLLHPTAVVKTRMQVAGSESWHVRGGTSVLAQILRSDGVSGIFRGFGTSAIGSIPGRVLALTSLEVSKDIILKHTQATHIPEASRVGLANALAGMISNLVSCVYFVPLDVICQRLMVQGLPGTTFCRGPFDVVRKVVETEGFRGLYRGFGLTAITQSPASALWWGSYAAAQHLIWRSLGYKDDTGEKPSHVEMVTVQASAGMVAGACSSVITTPIDTVKTRLQVMDNYGSERPSVLKTAKILLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQSSLRSFT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01914 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 113 IPR018108 -
Viun6g01914 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 235 322 IPR018108 -
Viun6g01914 332 Gene3D Mitochondrial carrier domain 127 329 IPR023395 -
Viun6g01914 332 Gene3D Mitochondrial carrier domain 24 126 IPR023395 -
Viun6g01914 332 SUPERFAMILY Mitochondrial carrier 24 318 IPR023395 -
Viun6g01914 332 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 12 326 - -
Viun6g01914 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 216 IPR018108 -
Viun6g01914 332 Pfam Mitochondrial carrier protein 239 324 IPR018108 -
Viun6g01914 332 Pfam Mitochondrial carrier protein 132 218 IPR018108 -
Viun6g01914 332 Pfam Mitochondrial carrier protein 37 117 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01914 Viun-Chr6 26023646 26026620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01914 18 322 Chloroplast and Mitochondria Gene Families AT5G15640 50.163 3.47e-102 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01914 K15121 - gmx:112997745 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01914 6 26023646 26026620 Viun6g01914 6 26023646 26026620 ECH